RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FAM57AQ8TBR7 257 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 SPPL2BQ8TCT7 592 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 NEK7Q8TDX7 302 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 PHB2Q99623 299 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 CA10Q9NS85 328 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 GID8Q9NWU2 228 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 NEU3Q9UQ49 428 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 C14orf166Q9Y224 244 aaKnown RBP3.37□□□□□ -1.87
LSM5-205ENST00000409952 BTRCQ9Y297 605 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 ARHGEF11O15085 1522 aa3.37□□□□□ -1.87
LSM5-205ENST00000409952 C5orf63A6NC05 138 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 TRIM49D1C9J1S8 452 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 D6RAR5 112 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 K7EPK0 472 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 COPEO14579 308 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 CHP2O43745 196 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 OR2B3O76000 313 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 APCSP02743 223 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 REG1AP05451 166 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 CST2P09228 141 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 GATA2P23769 480 aaPredicted RBP3.36□□□□□ -1.87
LSM5-205ENST00000409952 LHX2P50458 406 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 RAB2AP61019 212 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 GNB2P62879 340 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 KRR1Q13601 381 aaKnown RBP3.36□□□□□ -1.87
LSM5-205ENST00000409952 TMEM97Q5BJF2 176 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 YIF1BQ5BJH7 314 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 MESTQ5EB52 335 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
LSM5-205ENST00000409952 TMEM42Q69YG0 159 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 DHRS4L2Q6PKH6 230 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 FA2HQ7L5A8 372 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 LYG2Q86SG7 212 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 PDPNQ86YL7 162 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ITPRIPQ8IWB1 547 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 TMEM86BQ8N661 226 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ARIH2OSQ8N7S6 290 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 LINC01555Q8NAE3 123 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 OR4K5Q8NGD3 323 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 OR1L8Q8NGR8 309 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 OR5H2Q8NGV7 314 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 JOSD2Q8TAC2 188 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 FAM172AQ8WUF8 416 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ZNF382Q96SR6 550 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 CDX2Q99626 313 aaPredicted RBP3.36□□□□□ -1.87
LSM5-205ENST00000409952 NIPSNAP1Q9BPW8 284 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 GFRA4Q9GZZ7 299 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 TXNIPQ9H3M7 391 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 SND1-IT1Q9HBX3 110 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 HES4Q9HCC6 221 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 TAC3Q9UHF0 121 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ZNF391Q9UJN7 358 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ZNF706Q9Y5V0 76 aaPredicted RBP3.36□□□□□ -1.87
LSM5-205ENST00000409952 ZNF532Q9HCE3 1301 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ANKRD30AQ9BXX3 1397 aa3.36□□□□□ -1.87
LSM5-205ENST00000409952 ISLRO14498 428 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 SCO1O75880 301 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 IGLV1-47P01700 117 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 CRYBA1P05813 215 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 CD5P06127 495 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TGFBR2P37173 567 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 RPL19P84098 196 aaKnown RBP3.35□□□□□ -1.87
LSM5-205ENST00000409952 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
LSM5-205ENST00000409952 BATFQ16520 125 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TEX30Q5JUR7 227 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TMEM215Q68D42 235 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 ELP2Q6IA86 826 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 Q6ZRU5 148 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 ORMDL3Q8N138 153 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 C1orf158Q8N1D5 194 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TMEM256Q8N2U0 113 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 NATD1Q8N6N6 113 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TEX47Q8TBZ9 253 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 SLC35B4Q969S0 331 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 PDXPQ96GD0 296 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 OR7D2Q96RA2 312 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 IFI27L2Q9H2X8 130 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 OR51I2Q9H344 312 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 PLSCR3Q9NRY6 295 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TNFRSF19Q9NS68 423 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 HDGFL3Q9Y3E1 203 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 TMEM131Q92545 1883 aa3.35□□□□□ -1.87
LSM5-205ENST00000409952 A0A087WUJ7 227 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 C5orf49A4QMS7 147 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 ARGFXA6NJG6 315 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 PHOX2AO14813 284 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 NOS1APO75052 506 aaPredicted RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 CGAP01215 116 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 MAS1P04201 325 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 OR5G3P0C626 314 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 CTSEP14091 401 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 NELFEP18615 380 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 MSNP26038 577 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 CDK9P50750 372 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 ESRRGP62508 458 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 RPS24P62847 133 aaKnown RBP3.34□□□□□ -1.87
LSM5-205ENST00000409952 IFITM2Q01629 132 aa3.34□□□□□ -1.87
LSM5-205ENST00000409952 ATP5G2Q06055 141 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms