RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 C5orf66Q9H5L9 145 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF665Q9H7R5 613 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 GPN1Q9HCN4 374 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 KCNIP1Q9NZI2 227 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR1A1Q9P1Q5 309 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 SLC23A1Q9UHI7 598 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 HRNRQ86YZ3 2850 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 DSCAMO60469 2012 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 BOLA2-SMG1P6H3BVE0 249 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 MGST3O14880 152 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 VAMP1P23763 118 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 KCNJ3P48549 501 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 MECP2P51608 486 aaKnown RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 HERV-K104P61576 105 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 FCN2Q15485 313 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR4A4PQ8NGN8 299 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR13A1Q8NGR1 328 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR1L1Q8NH94 360 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 OR10J5Q8NHC4 309 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 CHAC2Q8WUX2 184 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 SDSLQ96GA7 329 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 FXYD6Q9H0Q3 95 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 GPR132Q9UNW8 380 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 KLF2Q9Y5W3 355 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-204ENST00000409727 FLNCQ14315 2725 aa10.38□□□□□ -0.75
CHMP3-204ENST00000409727 LRBAP50851 2863 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 MYO18BQ8IUG5 2567 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 USP9XQ93008 2570 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-204ENST00000409727 FAM172BPA6NC97 362 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 HSPA12AO43301 675 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-204ENST00000409727 PPYP01298 95 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 HLA-AP01891 365 aaKnown RBP10.37□□□□□ -0.75
CHMP3-204ENST00000409727 NDUFB7P17568 137 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 FPR2P25090 351 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 SSTR5P35346 364 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 IL13RA1P78552 427 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 LTC4SQ16873 150 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF788Q6ZQV5 615 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 MUC20Q8N307 709 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-204ENST00000409727 RTBDNQ9BSG5 229 aaPredicted RBP10.37□□□□□ -0.75
CHMP3-204ENST00000409727 DNTTIP1Q9H147 329 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF221Q9UK13 617 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 DOPEY1Q5JWR5 2465 aa10.37□□□□□ -0.75
CHMP3-204ENST00000409727 ODAMA1E959 279 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 ADAM20O43506 726 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 DIRAS3O95661 229 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 IL5P05113 134 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 DHRS2Q13268 280 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 KIAA2026Q5HYC2 2103 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 AVPI1Q5T686 147 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 ZNF626Q68DY1 528 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 FAM53AQ6NSI3 398 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SLC25A42Q86VD7 318 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 RFESDQ8TAC1 157 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 CASTOR1Q8WTX7 329 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SCGB3A2Q96PL1 93 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 CLEC4MQ9H2X3 399 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SEBOXQ9HB31 216 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 MYOZ1Q9NP98 299 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 MGAT4AQ9UM21 535 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 C14orf166Q9Y224 244 aaKnown RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 KMT2BQ9UMN6 2715 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SIGLEC5O15389 551 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 NDUFS7O75251 213 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 CLDN1O95832 211 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 HBZP02008 142 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 DAOP14920 347 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 CXCL3P19876 107 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 IL2RGP31785 369 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 P2RX3P56373 397 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 HMGN3Q15651 99 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 PHLDA2Q53GA4 152 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 OR11H7Q8NGC8 314 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 OR5D13Q8NGL4 314 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SECTM1Q8WVN6 248 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 MOB3AQ96BX8 217 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 GALMQ96C23 342 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 DMRTB1Q96MA1 342 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 TMEM246Q9BRR3 403 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 RANGRFQ9HD47 186 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 SLC25A10Q9UBX3 287 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 FBXO9Q9UK97 447 aaPredicted RBP10.36□□□□□ -0.75
CHMP3-204ENST00000409727 PCDHB10Q9UN67 800 aa10.36□□□□□ -0.75
CHMP3-204ENST00000409727 TANC2Q9HCD6 1990 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms