RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 C9orf106Q8NAJ2 232 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 OR5A2Q8NGI9 324 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TMED6Q8WW62 240 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 RDH5Q92781 318 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 S100PBPQ96BU1 408 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 TP53RKQ96S44 253 aa12.94□□□□□ -0.34
SCAMP4-202ENST00000409472 HS3ST1O14792 307 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 NUBP1P53384 320 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 TCF15Q12870 199 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 FOXF2Q12947 444 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 CLEC9AQ6UXN8 241 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 NEK7Q8TDX7 302 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 RHOVQ96L33 236 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 NEU1Q99519 415 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 Q9N2K0 584 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 OR2S2Q9NQN1 319 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 IGKV1D-13A0A0B4J2D9 117 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 AGFG2O95081 481 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 SFTA3P0C7M3 94 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 IGKV1-13P0DP09 117 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 HMGN3Q15651 99 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 SAXO1Q8IYX7 474 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 AQP10Q96PS8 301 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 SLC5A7Q9GZV3 580 aa12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-202ENST00000409472 TRAV39A0A0B4J263 110 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 TRAV24A0A0B4J272 114 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 DIRAS3O95661 229 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 RAB5AP20339 215 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 ANKRD39Q53RE8 183 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 DNLZQ5SXM8 178 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 IGFL2Q6UWQ7 119 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 SUMF2Q8NBJ7 301 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 NANOS1Q8WY41 292 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 MSI2Q96DH6 328 aaKnown RBP12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 MALSU1Q96EH3 234 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 HIST1H2AAQ96QV6 131 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 RHOFQ9HBH0 211 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 TSTD3H0UI37 97 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 HKR1P10072 659 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 GNRHRP30968 328 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 CD81P60033 236 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 NAAAQ02083 359 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 TBC1D28Q2M2D7 210 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 PYY3Q5JQD4 70 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 ZNF585AQ6P3V2 769 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM214BQ7L5A3 538 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 MKXQ8IYA7 352 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 GALNT14Q96FL9 552 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 BSCL2Q96G97 398 aaPredicted RBP12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 RSRP1Q9BUV0 290 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 CNTNAP3Q9BZ76 1288 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 OR51I2Q9H344 312 aa12.92□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 TCAPO15273 167 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 PHF1O43189 567 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 IFNA17P01571 189 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 KIR2DL2P43627 348 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 CAV2P51636 162 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 HERV-K104P61576 105 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 GNG3P63215 75 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 GABRA6Q16445 453 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 RPL7L1Q6DKI1 246 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 MEX3BQ6ZN04 569 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 OR52M1Q8NGK5 317 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 MRPL30Q8TCC3 161 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 SECTM1Q8WVN6 248 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 COL25A1Q9BXS0 654 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 RPS10P5Q9NQ39 176 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 TUBD1Q9UJT1 453 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 MPC1Q9Y5U8 109 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 BTBD17A6NE02 478 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 H0YL77 283 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 LRP3O75074 770 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 MBPP02686 304 aaPredicted RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 HIST1H1BP16401 226 aaKnown RBP12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 DDTP30046 118 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 MPV17P39210 176 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 PPP1CBP62140 327 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
SCAMP4-202ENST00000409472 BAP18Q8IXM2 172 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms