RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 EGR4Q05215 589 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ENDOGQ14249 297 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 BSXQ3C1V8 233 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 FNDC7Q5VTL7 733 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 KCNIP4Q6PIL6 250 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 COX15Q7KZN9 410 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 C16orf82Q7Z2V1 217 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 C17orf82Q86X59 251 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ZNF761Q86XN6 746 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 MACROD1Q9BQ69 325 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 NICN1Q9BSH3 213 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 PARD6GQ9BYG4 376 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 TXNIPQ9H3M7 391 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 NPIPB13A6NJU9 1138 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ZNF705FA8MVS1 300 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 NPIPB4C9JG80 1138 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 CYR61O00622 381 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 TIAF1O95411 115 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ZNF705DP0CH99 300 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ZNF705BP0CI00 300 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 BMP5P22003 454 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 NPBWR2P48146 333 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 TPPP2P59282 170 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 SGCBQ16585 318 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 DNM1P34Q6PK57 102 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 GLIPR1L1Q6UWM5 242 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 IL22RA1Q8N6P7 574 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 OR2M7Q8NG81 312 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 RNF133Q8WVZ7 376 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ARHGAP5-AS1Q96IT6 56 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 VSTM2LQ96N03 204 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ALKBH7Q9BT30 221 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 ABHD14AQ9BUJ0 271 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 VAMP8Q9BV40 100 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 FAM206AQ9NX38 181 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 LRIT1Q9P2V4 623 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 CDC42EP3Q9UKI2 254 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 MRPS16Q9Y3D3 137 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 WIPI2Q9Y4P8 454 aa9.2□□□□□ -0.94
NIF3L1-204ENST00000409357 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 TRAV30A0A087WSZ9 112 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 H3BSH0 61 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 FGF17O60258 216 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 WDR1O75083 606 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 NDUFB8O95169 186 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 AHSA1O95433 338 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 MPIG6BO95866 241 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 HLA-DQA2P01906 255 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 TTRP02766 147 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 H2BFMP0C1H6 154 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 GLB1P16278 677 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 CCL1P22362 96 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 DTYMKP23919 212 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 PEBP1P30086 187 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 RPS27P42677 84 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 OR1D5P58170 312 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 YPEL3P61236 119 aaPredicted RBP9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 SERF2P84101 59 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 OR5AS1Q8N127 324 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 C10orf53Q8N6V4 93 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 CCDC71LQ8N9Z2 235 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 RASL10BQ96S79 203 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 NRTNQ99748 197 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 ATP5SQ99766 215 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 SCN3AQ9NY46 2000 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 MRPL27Q9P0M9 148 aaKnown RBP9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 UQCR10Q9UDW1 63 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 TBC1D29Q9UFV1 150 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 HEBP2Q9Y5Z4 205 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
NIF3L1-204ENST00000409357 BSNQ9UPA5 3926 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 HELZ2Q9BYK8 2649 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 TRAV36DV7A0A075B6V5 113 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 IGSF23A1L1A6 192 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 BLACEA4D250 179 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 REG1AP05451 166 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 CT62P0C5K7 136 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 CTRLP40313 264 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 SLC6A8P48029 635 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 CEBPGP53567 150 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 PIGPP57054 158 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 FOXL1Q12952 345 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 EXOSC7Q15024 291 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 FBXO42Q6P3S6 717 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 TIPARPQ7Z3E1 657 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 OR4N5Q8IXE1 308 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 LYG1Q8N1E2 194 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 PNKDQ8N490 385 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 OR52R1Q8NGF1 315 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 OR2AJ1Q8NGZ0 328 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 OR5B3Q8NH48 314 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 ADAMTS18Q8TE60 1221 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 SLC37A2Q8TED4 501 aa9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 PINX1Q96BK5 328 aaKnown RBP9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 ADAT3Q96EY9 351 aaPredicted RBP9.18□□□□□ -0.94
NIF3L1-204ENST00000409357 WDYHV1Q96HA8 205 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms