RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 FAM27E3Q08E93 113 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 MSMPQ1L6U9 139 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 SLC35E4Q6ICL7 350 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 ALKBH2Q6NS38 261 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 OR10Z1Q8NGY1 313 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 CCL28Q9NRJ3 127 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 Q9UFV3 132 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 UBE2J1Q9Y385 318 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-204ENST00000409286 ANKRD11Q6UB99 2663 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-204ENST00000409286 TMEM30CPA0ZSE6 113 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 KCNAB3O43448 404 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 DEDDO75618 318 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 KLF3P57682 345 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-204ENST00000409286 HMGN3Q15651 99 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 SMIM21Q3B7S5 101 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 PDZD9Q8IXQ8 264 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 OR2Z1Q8NG97 314 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 SHARPINQ9H0F6 387 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 UFSP2Q9NUQ7 469 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 DUSP13Q9UII6 198 aa16.32■□□□□ 0.2
LIMS2-204ENST00000409286 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-204ENST00000409286 HSD17B6O14756 317 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 CFHR2P36980 270 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 LRP11Q86VZ4 500 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 BVESQ8NE79 360 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 LILRB1Q8NHL6 650 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-204ENST00000409286 LHFPL5Q8TAF8 219 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 SNRNP40Q96DI7 357 aaKnown RBP16.31■□□□□ 0.2
LIMS2-204ENST00000409286 SEBOXQ9HB31 216 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-204ENST00000409286 ERRFI1Q9UJM3 462 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-204ENST00000409286 PRR14LQ5THK1 2151 aa16.31■□□□□ 0.2
LIMS2-204ENST00000409286 IGLV3-9A0A075B6K5 115 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUXBA0A1W2PPF3 345 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 PSPNO60542 156 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 WNT2P09544 360 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 OR10V1Q8NGI7 309 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 TMEM171Q8WVE6 324 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 CYTL1Q9NRR1 136 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 KCNIP1Q9NZI2 227 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 SPENQ96T58 3664 aaKnown RBP16.3■□□□□ 0.2
LIMS2-204ENST00000409286 PIGBOS1A0A0B4J2F0 54 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 A0A1B0GW55 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 MSGN1A6NI15 193 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 TAAR5O14804 337 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 PGLYRP1O75594 196 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-204ENST00000409286 CDS2O95674 445 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L2P0CJ85 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L3P0CJ86 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L4P0CJ87 422 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L5P0CJ88 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L6P0CJ89 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4L7P0CJ90 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 TPT1P13693 172 aaKnown RBP16.3■□□□□ 0.2
LIMS2-204ENST00000409286 UCP1P25874 307 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 TMEM268Q5VZI3 342 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 SSX8Q7RTT4 187 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 FAM90A1Q86YD7 464 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 ZNF695Q8IW36 515 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 SELENOHQ8IZQ5 122 aaKnown RBP16.3■□□□□ 0.2
LIMS2-204ENST00000409286 IL1F10Q8WWZ1 152 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 IL22RA2Q969J5 263 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 AKR1E2Q96JD6 320 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 TAF9BQ9HBM6 251 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 JKAMPQ9P055 326 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 DUX4Q9UBX2 424 aa16.3■□□□□ 0.2
LIMS2-204ENST00000409286 MGAQ8IWI9 3026 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 TRAV39A0A0B4J263 110 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 H0Y980 276 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 C16orf97H3BN30 126 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 MBPP02686 304 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-204ENST00000409286 HEXAP06865 529 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 HKR1P10072 659 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 CEBPDP49716 269 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-204ENST00000409286 SELENOVP59797 346 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 RBPJQ06330 500 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 MEX3BQ6ZN04 569 aaKnown RBP16.29■□□□□ 0.2
LIMS2-204ENST00000409286 SLC35G3Q8N808 338 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 LRRC29Q8WV35 223 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 PLEKHA2Q9HB19 425 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 OR1A1Q9P1Q5 309 aa16.29■□□□□ 0.2
LIMS2-204ENST00000409286 ZSCAN5BA6NJL1 495 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 E5RGE8 158 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 CD40P25942 277 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 TESK1Q15569 626 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 AANATQ16613 207 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 FOXRED2Q8IWF2 684 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 OR5D13Q8NGL4 314 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 SPIN2AQ99865 258 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 SPIN2BQ9BPZ2 258 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 PFDN2Q9UHV9 154 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 NSG2Q9Y328 171 aa16.28■□□□□ 0.2
LIMS2-204ENST00000409286 LSM5Q9Y4Y9 91 aaKnown RBP16.28■□□□□ 0.2
LIMS2-204ENST00000409286 HEATR1Q9H583 2144 aaKnown RBP16.28■□□□□ 0.2
LIMS2-204ENST00000409286 ATP6V1G2-DDX39BF2Z307 99 aa16.27■□□□□ 0.2
LIMS2-204ENST00000409286 K7EPK0 472 aa16.27■□□□□ 0.2
LIMS2-204ENST00000409286 HSPA12AO43301 675 aa16.27■□□□□ 0.2
LIMS2-204ENST00000409286 RPL12P30050 165 aaKnown RBP16.27■□□□□ 0.2
LIMS2-204ENST00000409286 PAX5Q02548 391 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms