RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SPOCK3Q9BQ16 436 aa15.46■□□□□ 0.07
SMPD4-202ENST00000409031 LOC390937A0A1W2PQ73 354 aa15.46■□□□□ 0.07
SMPD4-202ENST00000409031 AGAP20933 346 aa15.46■□□□□ 0.07
SMPD4-202ENST00000409031 LBX1P52954 281 aa15.46■□□□□ 0.07
SMPD4-202ENST00000409031 ELSPBP1Q96BH3 223 aa15.46■□□□□ 0.07
SMPD4-202ENST00000409031 IGHV3-64DA0A0J9YX35 117 aa15.46■□□□□ 0.06
SMPD4-202ENST00000409031 A0A1W2PP11 408 aa15.46■□□□□ 0.06
SMPD4-202ENST00000409031 GAGE10A6NGK3 116 aa15.46■□□□□ 0.06
SMPD4-202ENST00000409031 DRD3P35462 400 aa15.46■□□□□ 0.06
SMPD4-202ENST00000409031 FOXJ2Q9P0K8 574 aa15.46■□□□□ 0.06
SMPD4-202ENST00000409031 IFI6P09912 130 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SRSF3P84103 164 aaKnown RBP15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SMIM21Q3B7S5 101 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SARGQ9BW04 601 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SPTY2D1-AS1A0A0U1RR47 76 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 HRKO00198 91 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 KBTBD11O94819 623 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 C12orf49Q9H741 205 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 OR5B21A6NL26 309 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM250H0YL14 139 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 FCGR3BO75015 233 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SOD3P08294 240 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SRP19P09132 144 aaKnown RBP15.45■□□□□ 0.06
SMPD4-202ENST00000409031 NDUFB7P17568 137 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 STARD6P59095 220 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM97Q5BJF2 176 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 BIVMQ86UB2 503 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 OR2D2Q9H210 308 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 CA11O75493 328 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 SRSF10O75494 262 aaKnown RBP15.45■□□□□ 0.06
SMPD4-202ENST00000409031 EIF3IQ13347 325 aaKnown RBP15.45■□□□□ 0.06
SMPD4-202ENST00000409031 FAM60AQ9NP50 221 aa15.45■□□□□ 0.06
SMPD4-202ENST00000409031 IFITM10A6NMD0 228 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM14DPA8MWL7 114 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 IGKV1D-16P01601 117 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 CXorf66Q5JRM2 361 aaPredicted RBP15.44■□□□□ 0.06
SMPD4-202ENST00000409031 ZNF519Q8TB69 540 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 HSPB8Q9UJY1 196 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 NGFRP08138 427 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 DEFA4P12838 97 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 F2RP25116 425 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 CTAG1AP78358 180 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 BCL2L2Q92843 193 aaPredicted RBP15.44■□□□□ 0.06
SMPD4-202ENST00000409031 RNF2Q99496 336 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 MMP17Q9ULZ9 603 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 IGLV1-36A0A0B4J1U3 117 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 A0A1W2PR80 420 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 NKX6-3A6NJ46 265 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 RPL36A-HNRNPH2H7BZ11 118 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 FAM87AP0C7U9 286 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 ZXDAP98168 799 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 OR4A4PQ8NGN8 299 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 Q8WTZ3 238 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 OR2V2Q96R30 315 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 DICER1Q9UPY3 1922 aaKnown RBP15.44■□□□□ 0.06
SMPD4-202ENST00000409031 IGKV1-8A0A0C4DH67 115 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 TGIF2LYQ8IUE0 185 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 GDF15Q99988 308 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 DNAJC4Q9NNZ3 241 aa15.44■□□□□ 0.06
SMPD4-202ENST00000409031 NDUFB4O95168 129 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 SLC25A5P05141 298 aaKnown RBP15.43■□□□□ 0.06
SMPD4-202ENST00000409031 LYRM7Q5U5X0 104 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 TMEM52Q8NDY8 209 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 MOB3AQ96BX8 217 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 DOCK1Q14185 1865 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 DOCK5Q9H7D0 1870 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 FAM157CP0CG43 387 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 LCN2P80188 198 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 ZP4Q12836 540 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 PIGYQ3MUY2 71 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 PARM1Q6UWI2 310 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 NDFIP1Q9BT67 221 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 MCM3APO60318 1980 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 ISLRO14498 428 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 THY1P04216 161 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 JOSD1Q15040 202 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-202ENST00000409031 VHLLQ6RSH7 139 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 SPSB2Q99619 263 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 TRPM6Q9BX84 2022 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 HES4Q9HCC6 221 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 BCL3P20749 454 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 GAS1P54826 345 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 PSG5Q15238 335 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 ZBTB34Q8NCN2 500 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 OR4P4Q8NGL7 312 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 TAF15Q92804 592 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMPD4-202ENST00000409031 WFIKKN1Q96NZ8 548 aa15.43■□□□□ 0.06
SMPD4-202ENST00000409031 H0Y980 276 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 HPRT1P00492 218 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 HLA-DQA1P01909 254 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 OR52M1Q8NGK5 317 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 MARS2Q96GW9 593 aaKnown RBP15.42■□□□□ 0.06
SMPD4-202ENST00000409031 RNF126Q9BV68 326 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 SCN3AQ9NY46 2000 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 A0A0U1RQV5 110 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 RHBDL1O75783 438 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 ANKRD33Q7Z3H0 272 aa15.42■□□□□ 0.06
SMPD4-202ENST00000409031 MRPL18Q9H0U6 180 aaKnown RBP15.42■□□□□ 0.06
SMPD4-202ENST00000409031 PSG2P11465 335 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms