RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
SMARCB1-204ENST00000407422 A0A1W2PPI3 338 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 A0A1W2PRX2 142 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 TMEM30CPA0ZSE6 113 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A18PA6NE21 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A16PA6NEW6 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A20PA6NIJ5 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A9PA6NNJ1 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A12PA8MX19 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A5PA8MXJ8 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 PIN1P1O15428 100 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 MAS1P04201 325 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 SNRNP70P08621 437 aaKnown RBP15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A15PP0C7V4 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A13PP0C7W8 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A14PP0C7W9 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM90A24PP0C7X0 464 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 WNT4P56705 351 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 TAS2R43P59537 309 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 MADCAM1Q13477 382 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 TCTEX1D4Q5JR98 221 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 GLIPR1L1Q6UWM5 242 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 CENPVQ7Z7K6 275 aaPredicted RBP15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 DRAM1Q8N682 238 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 OR10A7Q8NGE5 316 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 C15orf65H3BRN8 121 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 MYL12BO14950 172 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FAM106CPP0CH98 169 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 GZMHP20718 246 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 CD83Q01151 205 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 C10orf99Q6UWK7 81 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 NANOGP1Q8N7R0 232 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 NEK7Q8TDX7 302 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 CYYR1Q96J86 154 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 FKBP14Q9NWM8 211 aa15.35■□□□□ 0.05
SMARCB1-204ENST00000407422 MT-ND4P03905 459 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 GPR176Q14439 515 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 C9orf152Q5JTZ5 239 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 ZNF497Q6ZNH5 498 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 SLC16A12Q6ZSM3 486 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 LYPD6Q86Y78 171 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 OR4F17Q8NGA8 305 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 OR10X1Q8NGY0 326 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 TFAP2CQ92754 450 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 ARL11Q969Q4 196 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 OR4F4Q96R69 305 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 BANF2Q9H503 90 aa15.34■□□□□ 0.05
SMARCB1-204ENST00000407422 PRB2P02812 416 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 INSL4Q14641 139 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 OXLD1Q5BKU9 147 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 KPRPQ5T749 579 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 AWAT2Q6E213 333 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 THNSL2Q86YJ6 484 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 TMEM104Q8NE00 496 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 RCC2Q9P258 522 aaKnown RBP15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 NKX1-2Q9UD57 310 aaPredicted RBP15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 MOB4Q9Y3A3 225 aa15.33■□□□□ 0.04
SMARCB1-204ENST00000407422 IGHV3-43A0A0B4J1X8 118 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 CD1AP06126 327 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 IGHV3-43DP0DP04 118 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 VHLP40337 213 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 REG1BP48304 166 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 LOXL3P58215 753 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 HES1Q14469 280 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 HNF4GQ14541 408 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 M0QZK8 103 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 AIPO00170 330 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 SDCBPO00560 298 aaPredicted RBP15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 RAB7AP51149 207 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 RAB12Q6IQ22 244 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 CDH26Q8IXH8 852 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 OR8H3Q8N146 312 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 MRPS24Q96EL2 167 aaKnown RBP15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 SELENOIQ9C0D9 397 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 ERGIC3Q9Y282 383 aa15.32■□□□□ 0.04
SMARCB1-204ENST00000407422 TCRBV4S1A1TA0A5B7 111 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 ERICH4A6NGS2 130 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 MCRIP1C9JLW8 97 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 HSD17B6O14756 317 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 ORC5O43913 435 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 IGKV1D-33P01593 117 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 IGKV1-33P01594 117 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 MGMTP16455 207 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 TMEM11P17152 192 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 OR52M1Q8NGK5 317 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 SGCDQ92629 289 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 MYDGFQ969H8 173 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 SPACA1Q9HBV2 294 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 GFOD1Q9NXC2 390 aa15.31■□□□□ 0.04
SMARCB1-204ENST00000407422 C12orf77C9JDV5 145 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 PTGES3LE9PB15 166 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 CCRL2O00421 344 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 CRTAPO75718 401 aaPredicted RBP15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 CDK1P06493 297 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 GP2P55259 537 aaKnown RBP15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 FAM27D1Q5T7N8 215 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 SYT6Q5T7P8 510 aaPredicted RBP15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 C5orf56Q8N8D9 126 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 OR4K15Q8NH41 348 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms