RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 DYNC1I2Q13409 638 aaKnown RBP13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 PRAMEF5Q5TYX0 476 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 GPR157Q5UAW9 335 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 Q6ZPA2 131 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 C5orf24Q7Z6I8 188 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 RFESDQ8TAC1 157 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 ACOT12Q8WYK0 555 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 MBNL3Q9NUK0 354 aaKnown RBP13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 CALYQ9NYX4 217 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 ZNF69Q9UC07 566 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 ELF5Q9UKW6 265 aaPredicted RBP13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 NUP50Q9UKX7 468 aa13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 SOX21Q9Y651 276 aaPredicted RBP13.73□□□□□ -0.21
HMGA1P7-201ENST00000406908 IGHV1-69DA0A0B4J2H0 117 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 NPIPB11E5RHQ5 1161 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 IGHV1-69P01742 117 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 SSTR5P35346 364 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 ZNF260Q3ZCT1 412 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 CDNFQ49AH0 187 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 UBE2NLQ5JXB2 153 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 RUSC1-AS1Q66K80 236 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 HEPN1Q6WQI6 88 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 BRD3OSQ6XYD6 125 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 BCL6BQ8N143 479 aaPredicted RBP13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 PNKDQ8N490 385 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 CMSS1Q9BQ75 279 aaKnown RBP13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 HEXA-AS1Q9H8Q6 139 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
HMGA1P7-201ENST00000406908 TRBV6-6A0A0A6YYG2 114 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 SMIM31A0A1B0GVY4 71 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 A0A1W2PRD5 423 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 A0A1W2PRF3 423 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 A0A1W2PRM7 423 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 C12orf77C9JDV5 145 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 ZNF701M0R085 212 aaPredicted RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 ORC5O43913 435 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 HPGDSO60760 199 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 CLPXO76031 633 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 SCGNO76038 276 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 EIF4EP06730 217 aaKnown RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 FAM157CP0CG43 387 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 COX7A1P24310 79 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 UTF1Q5T230 341 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 NCR3LG1Q68D85 454 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 ZNF880Q6PDB4 577 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 DTX3Q8N9I9 347 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 C22orf15Q8WYQ4 148 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 AP3S1Q92572 193 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 ARL11Q969Q4 196 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 S100A16Q96FQ6 103 aaKnown RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 CMTM3Q96MX0 182 aa13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 RIMS4Q9H426 269 aaPredicted RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 CHMP1AQ9HD42 196 aaPredicted RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.21
HMGA1P7-201ENST00000406908 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 A0A0A6YYH2 397 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 A6NJ64 397 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 EPHA1P21709 976 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 SOX6P35712 828 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 UBE2E1P51965 193 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 LTC4SQ16873 150 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 MZT2AQ6P582 158 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 IZUMO1Q8IYV9 350 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 PHF21AQ96BD5 680 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 KIRREL1Q96J84 757 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 SUCNR1Q9BXA5 334 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 MS4A7Q9GZW8 240 aaPredicted RBP13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 TMEM133Q9H2Q1 129 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 TAF9BQ9HBM6 251 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 DIABLOQ9NR28 239 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 IDI2-AS1Q9NZ38 188 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 NDUFA13Q9P0J0 144 aa13.7□□□□□ -0.22
HMGA1P7-201ENST00000406908 TMEM235A6NFC5 223 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 SERPINE3A8MV23 424 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 APOA1P02647 267 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 GSTP1P09211 210 aaKnown RBP13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 CD3GP09693 182 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 ELK1P19419 428 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 NFYBP25208 207 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 GUCA2AQ02747 115 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 ARL6IP1Q15041 203 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 TRAT1Q6PIZ9 186 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 OR1L1Q8NH94 360 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 SETD6Q8TBK2 473 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 DGCR14Q96DF8 476 aaKnown RBP13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 SLIRPQ9GZT3 109 aaKnown RBP13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 Q9N2K0 584 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 C12orf4Q9NQ89 552 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
HMGA1P7-201ENST00000406908 A0A087X0M5 115 aa13.68□□□□□ -0.22
HMGA1P7-201ENST00000406908 A0A1B0GX30 115 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms