RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SSTP61278 116 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 SRYQ05066 204 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 FAM185AQ8N0U4 392 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 C17orf78Q8N4C9 275 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 CABLES2Q9BTV7 478 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 SEBOXQ9HB31 216 aaPredicted RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 FBXO7Q9Y3I1 522 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 R4GN57 208 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 HSD17B6O14756 317 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 MRPL33O75394 65 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 DYNLT3P51808 116 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 RPS23P62266 143 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 SNRPEP62304 92 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 RUNX1Q01196 453 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 CLINT1Q14677 625 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 IZUMO4Q1ZYL8 232 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 MPV17LQ2QL34 196 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 RNF212Q495C1 297 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 FAM76BQ5HYJ3 339 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 HAPLN4Q86UW8 402 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 OR5D13Q8NGL4 314 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 CALHM2Q9HA72 323 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 BIN3Q9NQY0 253 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 LUZP4Q9P127 313 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 PRSS50Q9UI38 385 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 STRAPQ9Y3F4 350 aaKnown RBP8.37□□□□□ -1.07
MSH2-202ENST00000406134 NCOR1O75376 2440 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 KIAA2026Q5HYC2 2103 aa8.37□□□□□ -1.07
MSH2-202ENST00000406134 hCG_1809904A0A1W2PP81 198 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 A0A1W2PR64 198 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 A0A1W2PRV1 198 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 H0Y980 276 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 TNFSF12O43508 249 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 CEACAM1P13688 526 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 PTAFRP25105 342 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 CAMLGP49069 296 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 HERV-K104P61576 105 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 TESK1Q15569 626 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 SWI5Q1ZZU3 235 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 H1FOOQ8IZA3 346 aaPredicted RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 TMEM251Q8N6I4 163 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 FAM173AQ9BQD7 235 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 OR1A1Q9P1Q5 309 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 PPIHO43447 177 aaKnown RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 ARG1P05089 322 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 GLP1RP43220 463 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 SULT1A1P50225 295 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 RAB5CP51148 216 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 ICAM4Q14773 271 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 ARL6IP6Q8N6S5 226 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 MALSU1Q96EH3 234 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 C5orf30Q96GV9 206 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 OR51I2Q9H344 312 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 RPS10P5Q9NQ39 176 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 PLA2G3Q9NZ20 509 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 A0A1B0GV50 99 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 A0A1W2PR80 420 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 FAM166BA8MTA8 275 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 UMAD1C9J7I0 102 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 FBP1P09467 338 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 OR8U8P0C7N1 319 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 RNF224P0DH78 156 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 CCNOP22674 350 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 NKX2-1P43699 371 aaPredicted RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 ARL16Q0P5N6 197 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 ZNF154Q13106 437 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 C1orf210Q8IVY1 113 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 ZFP62Q8NB50 900 aaPredicted RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 OR5C1Q8NGR4 320 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 GTF3AQ92664 365 aaKnown RBP8.36□□□□□ -1.07
MSH2-202ENST00000406134 ABHD14BQ96IU4 210 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 DDA1Q9BW61 102 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 FAM186AA6NE01 2351 aa8.36□□□□□ -1.07
MSH2-202ENST00000406134 DCHS1Q96JQ0 3298 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 BORCS7-ASMTA0A0B4J1R7 106 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 C1QTNF9BB2RNN3 333 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 HOXA4Q00056 320 aaPredicted RBP8.35□□□□□ -1.07
MSH2-202ENST00000406134 LPAL2Q16609 132 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 HIKESHIQ53FT3 197 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 OR5A2Q8NGI9 324 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 FAM213BQ8TBF2 198 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 APOBEC3DQ96AK3 386 aaPredicted RBP8.35□□□□□ -1.07
MSH2-202ENST00000406134 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 CST7O76096 145 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 IGKV1-5P01602 117 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 SNRNP70P08621 437 aaKnown RBP8.35□□□□□ -1.07
MSH2-202ENST00000406134 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
MSH2-202ENST00000406134 OMGP23515 440 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 HMGN3Q15651 99 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 ZNF726P1Q15940 193 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 MDS2Q8NDY4 140 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 OR8G5Q8NG78 346 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 PLEKHF2Q9H8W4 249 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 DLL3Q9NYJ7 618 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms