RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 LRRK1Q38SD2 2015 aa12.21□□□□□ -0.46
DUSP28-202ENST00000405954 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.46
DUSP28-202ENST00000405954 TRAV39A0A0B4J263 110 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 ANGPTL7O43827 346 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 KBTBD11O94819 623 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 MT-CO2P00403 227 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 IL15RAQ13261 267 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 KIAA1644Q3SXP7 199 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 OR1E3Q8WZA6 343 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 ERRFI1Q9UJM3 462 aaPredicted RBP12.2□□□□□ -0.46
DUSP28-202ENST00000405954 IGFBP3P17936 291 aaPredicted RBP12.2□□□□□ -0.46
DUSP28-202ENST00000405954 OR1D4P47884 311 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 ACTL10Q5JWF8 245 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 AMMECR1LQ6DCA0 310 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 TSTD1Q8NFU3 115 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 RBM24Q9BX46 236 aaKnown RBP12.2□□□□□ -0.46
DUSP28-202ENST00000405954 UBE2L5PA0A1B0GUS4 154 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 PRRT4C9JH25 899 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 PAGE4O60829 102 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 ZNF217O75362 1048 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 ADMP35318 185 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 PRRX1P54821 245 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 HBG1P69891 147 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 HBG2P69892 147 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 COA6Q5JTJ3 125 aaKnown RBP12.2□□□□□ -0.46
DUSP28-202ENST00000405954 TCEAL8Q8IYN2 117 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 OR51H1Q8NH63 302 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 IFI44Q8TCB0 444 aa12.2□□□□□ -0.46
DUSP28-202ENST00000405954 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 LILRA1O75019 489 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 CD46P15529 392 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 MDH2P40926 338 aaKnown RBP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 THBS3P49746 956 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 ZIC1Q15915 447 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 SAXO1Q8IYX7 474 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 HDAC8Q9BY41 377 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 TBL2Q9Y4P3 447 aaKnown RBP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 MED12Q93074 2177 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 DLX2Q07687 328 aaPredicted RBP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 EXT1Q16394 746 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 NAT6Q93015 286 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 ARRDC3Q96B67 414 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 SERTAD4Q9NUC0 356 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 MED29Q9NX70 200 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 C3orf85A0A1B0GTC6 90 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 VSTM2BA6NLU5 285 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 CD300LBA8K4G0 201 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 TMEM14DPA8MWL7 114 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 M0R1X1 148 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 SLC31A1O15431 190 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 NRASP01111 189 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 KRASP01116 189 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 IGKV1D-16P01601 117 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 TCN2P20062 427 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 MTCP1P56278 107 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 RPS16P62249 146 aaKnown RBP12.19□□□□□ -0.46
DUSP28-202ENST00000405954 PSG6Q00889 435 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 TGFBR3Q03167 851 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 SAMD13Q5VXD3 122 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 WDYHV1Q96HA8 205 aa12.19□□□□□ -0.46
DUSP28-202ENST00000405954 A0A0A6YYD4 124 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 DPRXA6NFQ7 191 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 ZNF891A8MT65 544 aaPredicted RBP12.18□□□□□ -0.46
DUSP28-202ENST00000405954 SPINT1O43278 529 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 OPN1LWP04000 364 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 SRPXP78539 464 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 NHLH1Q02575 133 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 DMWDQ09019 674 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 TMEM187Q14656 261 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 KISS1Q15726 138 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 C9orf50Q5SZB4 431 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 VSIRQ9H7M9 311 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 DIDO1Q9BTC0 2240 aaKnown RBP12.18□□□□□ -0.46
DUSP28-202ENST00000405954 IGKV1D-8A0A087WSZ0 117 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 B4DGG1 531 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 NKX2-2O95096 273 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 CTSSP25774 331 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
DUSP28-202ENST00000405954 P2RX4Q99571 388 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 OBSL1O75147 1896 aa12.18□□□□□ -0.46
DUSP28-202ENST00000405954 TRAV30A0A087WSZ9 112 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 K7EP13 123 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 HYPMO75409 117 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 HSBP1O75506 76 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 CBR3O75828 277 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SOX8P57073 446 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 SLC35B1P78383 322 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
DUSP28-202ENST00000405954 S1PR5Q9H228 398 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 TRIOBPQ9H2D6 2365 aa12.17□□□□□ -0.46
DUSP28-202ENST00000405954 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms