RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 DDA1Q9BW61 102 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 DEPPQ9NTK1 212 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 DCAF16Q9NXF7 216 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 CACNA1GO43497 2377 aa12.95□□□□□ -0.34
ATG4B-206ENST00000405546 OR4A8P0C604 315 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 C3AR1Q16581 482 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 C1QL4Q86Z23 238 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 GZMBP10144 247 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 EPHA1P21709 976 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 EWSR1Q01844 656 aaKnown RBP eCLIP12.94□□□□□ -0.34
ATG4B-206ENST00000405546 P2RY6Q15077 328 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF611Q8N823 705 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 OR5C1Q8NGR4 320 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF286AQ9HBT8 521 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 SIRT7Q9NRC8 400 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 UBE2J1Q9Y385 318 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-206ENST00000405546 SPTBN2O15020 2390 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 SYNGR3O43761 229 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 CELA3AP09093 270 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 CTSSP25774 331 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 Q0VFX4 171 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 C6orf15Q6UXA7 325 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-206ENST00000405546 PRR18Q8N4B5 295 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 MRPL37Q9BZE1 423 aaKnown RBP12.94□□□□□ -0.34
ATG4B-206ENST00000405546 OR2H1Q9GZK4 316 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 DOCK11Q5JSL3 2073 aa12.94□□□□□ -0.34
ATG4B-206ENST00000405546 IGKV1-12A0A0C4DH73 117 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GPR137BO60478 399 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 IGKV1D-12P01611 117 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GPM6AP51674 278 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 ARF1P84077 181 aaKnown RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 PPA1Q15181 289 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 NCR3LG1Q68D85 454 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 SPSB3Q6PJ21 355 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 PPP1R32Q7Z5V6 425 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 CALHM1Q8IU99 346 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 MCEMP1Q8IX19 187 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 CT55Q8WUE5 264 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 CABLES2Q9BTV7 478 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 A0A1B0GUS0 222 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 K7N7A8 449 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 MBP02144 154 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 IZUMO4Q1ZYL8 232 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 MRPL21Q7Z2W9 205 aaKnown RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 TMEM105Q8N8V8 129 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 OR56B2PQ8NGI1 322 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 HIST1H2AAQ96QV6 131 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 SYT3Q9BQG1 590 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GPR87Q9BY21 358 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 PLEKHA2Q9HB19 425 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GPR35Q9HC97 309 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 IGSF23A1L1A6 192 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 NKX2-6A6NCS4 301 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 ST8SIA3O43173 380 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 PCBD1P61457 104 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 ICAM4Q14773 271 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 HIKESHIQ53FT3 197 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 RTL6Q6ICC9 239 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 CRIP3Q6Q6R5 217 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 LHFPL2Q6ZUX7 228 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 TIPARPQ7Z3E1 657 aaKnown RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 GINS3Q9BRX5 216 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 WNT5BQ9H1J7 359 aa12.93□□□□□ -0.34
ATG4B-206ENST00000405546 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-206ENST00000405546 A8MWP6 167 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 AMBPP02760 352 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 GNRHRP30968 328 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 CD200P41217 278 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF154Q13106 437 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 GNMTQ14749 295 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 TUSC5Q8IXB3 177 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 CPT1CQ8TCG5 803 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 NEU1Q99519 415 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF665Q9H7R5 613 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 SLC2A9Q9NRM0 540 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 AURKAIP1Q9NWT8 199 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 CACNA1HO95180 2353 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 HS3ST1O14792 307 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 CTSDP07339 412 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 CST2P09228 141 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 FOXG1P55316 489 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 ADIRFQ15847 76 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 KCNE4Q8WWG9 221 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 TM2D1Q9BX74 207 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 SLC7A10Q9NS82 523 aa12.92□□□□□ -0.34
ATG4B-206ENST00000405546 RBM7Q9Y580 266 aaKnown RBP12.92□□□□□ -0.34
ATG4B-206ENST00000405546 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms