RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 FGF7P21781 194 aa16■□□□□ 0.15
USP48-204ENST00000400301 CXorf66Q5JRM2 361 aaPredicted RBP16■□□□□ 0.15
USP48-204ENST00000400301 TMEM252Q8N6L7 170 aa16■□□□□ 0.15
USP48-204ENST00000400301 C15orf54Q8N8G6 183 aa16■□□□□ 0.15
USP48-204ENST00000400301 UBAC2Q8NBM4 344 aa16■□□□□ 0.15
USP48-204ENST00000400301 TMEM230Q96A57 120 aa16■□□□□ 0.15
USP48-204ENST00000400301 PINX1Q96BK5 328 aaKnown RBP16■□□□□ 0.15
USP48-204ENST00000400301 RNF126Q9BV68 326 aa16■□□□□ 0.15
USP48-204ENST00000400301 DYNLRB1Q9NP97 96 aa16■□□□□ 0.15
USP48-204ENST00000400301 LTBP2Q14767 1821 aa16■□□□□ 0.15
USP48-204ENST00000400301 PMELP40967 661 aa16■□□□□ 0.15
USP48-204ENST00000400301 TRIP6Q15654 476 aaKnown RBP16■□□□□ 0.15
USP48-204ENST00000400301 C4orf17Q53FE4 359 aa16■□□□□ 0.15
USP48-204ENST00000400301 RTN4RL2Q86UN3 420 aa16■□□□□ 0.15
USP48-204ENST00000400301 OR4A4PQ8NGN8 299 aa16■□□□□ 0.15
USP48-204ENST00000400301 PRDM14Q9GZV8 571 aa16■□□□□ 0.15
USP48-204ENST00000400301 PSG11Q9UQ72 335 aa16■□□□□ 0.15
USP48-204ENST00000400301 H0YIZ8 118 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 KLF7O75840 302 aaPredicted RBP15.99■□□□□ 0.15
USP48-204ENST00000400301 PSG2P11465 335 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 TMEM187Q14656 261 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 CLEC12BQ2HXU8 276 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 ZNF610Q8N9Z0 462 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 TAAR6Q96RI8 345 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 ATP5SQ99766 215 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 hCG_38984A0A1B0GV85 526 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
USP48-204ENST00000400301 NDUFB7P17568 137 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 SLC25A40Q8TBP6 338 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.99■□□□□ 0.15
USP48-204ENST00000400301 PRSS50Q9UI38 385 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 CDK2AP1O14519 115 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 FAM89BQ8N5H3 189 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 HPSE2Q8WWQ2 592 aa15.99■□□□□ 0.15
USP48-204ENST00000400301 M0R296 226 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 MBP02144 154 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 F2RP25116 425 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 FGF8P55075 233 aaPredicted RBP15.98■□□□□ 0.15
USP48-204ENST00000400301 RUNX1Q01196 453 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 TLE1Q04724 770 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 Q3ZCU0 254 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 DEFB124Q8NES8 71 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 MSI2Q96DH6 328 aaKnown RBP15.98■□□□□ 0.15
USP48-204ENST00000400301 hCG_1809904A0A1W2PP81 198 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 A0A1W2PR64 198 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 A0A1W2PRV1 198 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 C5orf63A6NC05 138 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 RRP8O43159 456 aaKnown RBP15.98■□□□□ 0.15
USP48-204ENST00000400301 SPP1P10451 314 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 MPZP25189 248 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 CTSSP25774 331 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 CALHM1Q8IU99 346 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 RAB39BQ96DA2 213 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 RCC2Q9P258 522 aaKnown RBP15.98■□□□□ 0.15
USP48-204ENST00000400301 KIF26AQ9ULI4 1882 aaPredicted RBP15.98■□□□□ 0.15
USP48-204ENST00000400301 MAP1LC3B2A6NCE7 125 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 PPP5D1E7EU14 171 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 CELA3AP09093 270 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 S1PR3Q99500 378 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 MAP1LC3BQ9GZQ8 125 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 M0R1X1 148 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 SLC23A3Q6PIS1 610 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 IL17BQ9UHF5 180 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 ATP23Q9Y6H3 246 aa15.98■□□□□ 0.15
USP48-204ENST00000400301 FABP9Q0Z7S8 132 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 BIVMQ86UB2 503 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 SERTAD4Q9NUC0 356 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 SPRY3O43610 288 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 ZNF83P51522 516 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 NCR3LG1Q68D85 454 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A10PA6NDY2 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A18PA6NE21 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A16PA6NEW6 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A20PA6NIJ5 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A8PA6NJQ4 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A7PA6NKC0 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A22PA8MWA6 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A12PA8MX19 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A5PA8MXJ8 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A23PA8MXZ1 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 SRSF10O75494 262 aaKnown RBP15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A15PP0C7V4 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A13PP0C7W8 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A14PP0C7W9 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 FAM90A24PP0C7X0 464 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 ACOT6Q3I5F7 207 aaPredicted RBP15.97■□□□□ 0.15
USP48-204ENST00000400301 SPINK9Q5DT21 86 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 LRRC29Q8WV35 223 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 DDA1Q9BW61 102 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 DOCK7Q96N67 2140 aa15.97■□□□□ 0.15
USP48-204ENST00000400301 IGKV1D-8A0A087WSZ0 117 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 MDFIC2A0A1B0GVS7 189 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 A0A1W2PPE2 198 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 SCAF4O95104 1147 aaKnown RBP15.96■□□□□ 0.15
USP48-204ENST00000400301 HAND1O96004 215 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 SULT1A1P50225 295 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 EIF4E3Q8N5X7 224 aaKnown RBP15.96■□□□□ 0.15
USP48-204ENST00000400301 H1FXQ92522 213 aaKnown RBP15.96■□□□□ 0.15
USP48-204ENST00000400301 UHRF2Q96PU4 802 aa15.96■□□□□ 0.15
USP48-204ENST00000400301 AGFG2O95081 481 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms