RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 TMEM65Q6PI78 240 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 DOCK10Q96BY6 2186 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 GPR137Q96N19 417 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 LINC00052Q96N35 136 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 TM2D1Q9BX74 207 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 RNF122Q9H9V4 155 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SLC2A8Q9NY64 477 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 NDUFB3O43676 98 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 APOA2P02652 100 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 VDAC1P21796 283 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SVBPQ8N300 66 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 ERGIC1Q969X5 290 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 OR2V2Q96R30 315 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 CLEC18AA5D8T8 446 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A10PA6NDY2 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A8PA6NJQ4 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A7PA6NKC0 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A22PA8MWA6 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A23PA8MXZ1 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SHOXO15266 292 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FCGR3BO75015 233 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 RHBDL1O75783 438 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 GNG10P50151 68 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 ELLP55199 621 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-202ENST00000399804 TMPRSS3P57727 454 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 TLE4Q04727 773 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 CLEC18CQ8NCF0 446 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SAV1Q9H4B6 383 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 SLC39A9Q9NUM3 307 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FBLN5Q9UBX5 448 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 FBXL17Q9UF56 701 aa12.03□□□□□ -0.48
SCAF4-202ENST00000399804 PRDX2P32119 198 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 CD80P33681 288 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 ALDH3B1P43353 468 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 TMEM33P57088 247 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 RPL7L1Q6DKI1 246 aaKnown RBP12.02□□□□□ -0.48
SCAF4-202ENST00000399804 THNSL2Q86YJ6 484 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 LAMP3Q9UQV4 416 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 OSGIN2Q9Y236 505 aa12.02□□□□□ -0.48
SCAF4-202ENST00000399804 LINC00862A6NCI5 91 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 OOEPA6NGQ2 149 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 SMPD2O60906 423 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 ZP1P60852 638 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 PSG7Q13046 419 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 OR2C3Q8N628 320 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
SCAF4-202ENST00000399804 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 ZGRF1Q86YA3 2104 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 ADAMTS9Q9P2N4 1935 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 SNRNP70P08621 437 aaKnown RBP12.02□□□□□ -0.49
SCAF4-202ENST00000399804 MMP7P09237 267 aaPredicted RBP12.02□□□□□ -0.49
SCAF4-202ENST00000399804 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
SCAF4-202ENST00000399804 ZNF154Q13106 437 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 LRRC10Q5BKY1 277 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 OR5D13Q8NGL4 314 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 CXorf58Q96LI9 332 aa12.02□□□□□ -0.49
SCAF4-202ENST00000399804 NKX2-6A6NCS4 301 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 GZMHP20718 246 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 RAB11AP62491 216 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 COL10A1Q03692 680 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 TLE1Q04724 770 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 RHEBQ15382 184 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 ANKRD55Q3KP44 614 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 ITLN1Q8WWA0 313 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 SRSF10O75494 262 aaKnown RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 NKX6-1P78426 367 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 FOXF2Q12947 444 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 OR10P1Q8NGE3 313 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
SCAF4-202ENST00000399804 TAAR6Q96RI8 345 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 SFXN3Q9BWM7 321 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 SH2D2AQ9NP31 389 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 WIPI2Q9Y4P8 454 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 GTF3C1Q12789 2109 aa12.01□□□□□ -0.49
SCAF4-202ENST00000399804 TUBAL3A6NHL2 446 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms