RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 TFAP2CQ92754 450 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 MUL1Q969V5 352 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 MRPS24Q96EL2 167 aaKnown RBP10.72□□□□□ -0.69
VCX3A-202ENST00000398729 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 DCLRE1BQ9H816 532 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 SPACA1Q9HBV2 294 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 MRPS28Q9Y2Q9 187 aaKnown RBP10.72□□□□□ -0.69
VCX3A-202ENST00000398729 PLXNB1O43157 2135 aa10.72□□□□□ -0.69
VCX3A-202ENST00000398729 TRAV39A0A0B4J263 110 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 A0A1W2PP11 408 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 M0QZK8 103 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 GNG10P50151 68 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 ABCA11PQ4W5N1 156 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 AWAT2Q6E213 333 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 GLIPR1L1Q6UWM5 242 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 LYG1Q8N1E2 194 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 NKAIN3Q8N8D7 197 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.69
VCX3A-202ENST00000398729 FKBP14Q9NWM8 211 aa10.71□□□□□ -0.69
VCX3A-202ENST00000398729 MCRIP1C9JLW8 97 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 AIPO00170 330 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 LPLP06858 475 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 RAB7AP51149 207 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
VCX3A-202ENST00000398729 CENPVQ7Z7K6 275 aaPredicted RBP10.7□□□□□ -0.7
VCX3A-202ENST00000398729 THNSL2Q86YJ6 484 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR8H3Q8N146 312 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR4F17Q8NGA8 305 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR5AU1Q8NGC0 362 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR52M1Q8NGK5 317 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR10X1Q8NGY0 326 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR56B4Q8NH76 319 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 ARL11Q969Q4 196 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 OR4F4Q96R69 305 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 MND1Q9BWT6 205 aa10.7□□□□□ -0.7
VCX3A-202ENST00000398729 DNAH9Q9NYC9 4486 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A18PA6NE21 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A16PA6NEW6 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A20PA6NIJ5 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A9PA6NNJ1 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A12PA8MX19 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A5PA8MXJ8 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 PTGES3LE9PB15 166 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 SDCBPO00560 298 aaPredicted RBP10.69□□□□□ -0.7
VCX3A-202ENST00000398729 PIN1P1O15428 100 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 ORC5O43913 435 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 MT-ND4P03905 459 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 CDK1P06493 297 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A15PP0C7V4 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A13PP0C7W8 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A14PP0C7W9 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A24PP0C7X0 464 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 RNLSQ5VYX0 342 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 ZNF497Q6ZNH5 498 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 CCDC107Q8WV48 283 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 MYDGFQ969H8 173 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 R3HDM4Q96D70 268 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 UQCC2Q9BRT2 126 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 RAB9BQ9NP90 201 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 SCN3BQ9NY72 215 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 RCC2Q9P258 522 aaKnown RBP10.69□□□□□ -0.7
VCX3A-202ENST00000398729 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
VCX3A-202ENST00000398729 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
VCX3A-202ENST00000398729 A0A1W2PPE3 182 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 A0A1W2PPI3 338 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A7PA6NKC0 464 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 FAM90A23PA8MXZ1 464 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 C15orf65H3BRN8 121 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 AMY1AP04745 511 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 AMY2AP04746 511 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 SNRNP70P08621 437 aaKnown RBP10.68□□□□□ -0.7
VCX3A-202ENST00000398729 MGMTP16455 207 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
VCX3A-202ENST00000398729 HES1Q14469 280 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 C9orf152Q5JTZ5 239 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 SAMD5Q5TGI4 173 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 LYPD6Q86Y78 171 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 MS4A15Q8N5U1 240 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 DRAM1Q8N682 238 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 SELENOIQ9C0D9 397 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 BANF2Q9H503 90 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 ETAA1Q9NY74 926 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 GHRLQ9UBU3 117 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 TRAPPC2LQ9UL33 140 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 PEX16Q9Y5Y5 336 aa10.68□□□□□ -0.7
VCX3A-202ENST00000398729 SH2D7A6NKC9 451 aaPredicted RBP10.67□□□□□ -0.7
VCX3A-202ENST00000398729 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 CCRL2O00421 344 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 HSD17B6O14756 317 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 SPINT2O43291 252 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 CRTAPO75718 401 aaPredicted RBP10.67□□□□□ -0.7
VCX3A-202ENST00000398729 GAPDHP04406 335 aaKnown RBP10.67□□□□□ -0.7
VCX3A-202ENST00000398729 TMEM11P17152 192 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 IL3RAP26951 378 aa10.67□□□□□ -0.7
VCX3A-202ENST00000398729 CD83Q01151 205 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms