RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 VDAC1P21796 283 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ZAR1Q86SH2 424 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 OR2C3Q8N628 320 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 NTNG2Q96CW9 530 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 OR2J1Q9GZK6 312 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 U3KQ87 197 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 GZMKP49863 264 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 AESQ08117 197 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM241Q24JQ0 296 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ATG4DQ86TL0 474 aaPredicted RBP12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ABHD17AQ96GS6 310 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF764Q96H86 408 aaPredicted RBP12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 PHOX2AO14813 284 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 ZBTB37Q5TC79 503 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 C5orf17Q8NAS9 161 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 WSB1Q9Y6I7 421 aa12.44□□□□□ -0.42
PCDHA11-201ENST00000398640 RALGAPA2Q2PPJ7 1873 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 FCN1O00602 326 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 ORM1P02763 201 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 RPL30P62888 115 aaKnown RBP12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 CD300LDQ6UXZ3 194 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 ZSWIM8A7E2V4 1837 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 HNRNPA3P51991 378 aaKnown RBP12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 VSIG4Q9Y279 399 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 GSTZ1O43708 216 aaPredicted RBP12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 ADAP1O75689 374 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 CTSSP25774 331 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 TCL1AP56279 114 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 MRGPRGQ86SM5 289 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 GAPTQ8N292 157 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 ATP5SQ99766 215 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 VAMP8Q9BV40 100 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 TEX50A0A1B0GTY4 177 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 COL10A1Q03692 680 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 SLC7A10Q9NS82 523 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 VSTM2AQ8TAG5 236 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 CCL13Q99616 98 aa12.43□□□□□ -0.42
PCDHA11-201ENST00000398640 PLAURQ03405 335 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 CDCP2Q5VXM1 449 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF596Q8TC21 504 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 PF4V1P10720 104 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 HMGA2P52926 109 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF154Q13106 437 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 FAM78BQ5VT40 261 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 HARBI1Q96MB7 349 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 SLC52A3Q9NQ40 469 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 PSG5Q15238 335 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 CCL28Q9NRJ3 127 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 MMP24Q9Y5R2 645 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 NAT2P11245 290 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 SCAND1P57086 179 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 MOGAT2Q3SYC2 334 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 PERPQ96FX8 193 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 SRD5A3Q9H8P0 318 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
PCDHA11-201ENST00000398640 SPCS3P61009 180 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 KLHDC1Q8N7A1 406 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 FBXL17Q9UF56 701 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF488Q96MN9 340 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 ANGPTL4Q9BY76 406 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 IGHV3-72A0A0B4J1Y9 119 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 TRAV34A0A0B4J273 112 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 MPC2O95563 127 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 ERGP11308 486 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 DIRC2Q96SL1 478 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 DTX4Q9Y2E6 619 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 KCNAB3O43448 404 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 GFRA1P56159 465 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 C21orf58P58505 322 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 LINC01560Q8TB33 94 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 SLIRPQ9GZT3 109 aaKnown RBP12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 PF4P02776 101 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 RPL31P62899 125 aaKnown RBP12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 SLC35B1P78383 322 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 IL13RA2Q14627 380 aa12.41□□□□□ -0.42
PCDHA11-201ENST00000398640 CHST1O43916 411 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 TIAF1O95411 115 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 HPXP02790 462 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 SLC6A1P30531 599 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 FDX2Q6P4F2 183 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 OR8I2Q8N0Y5 310 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 LSM6P62312 80 aaKnown RBP12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 PCOLCEQ15113 449 aa12.4□□□□□ -0.42
PCDHA11-201ENST00000398640 SLC35E4Q6ICL7 350 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms