RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 EFNB3Q15768 340 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 IAH1Q2TAA2 248 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-201ENST00000398193 ALKBH6Q3KRA9 238 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 CISD2Q8N5K1 135 aaKnown RBP6.22□□□□□ -1.41
RGPD1-201ENST00000398193 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.22□□□□□ -1.41
RGPD1-201ENST00000398193 OR5T2Q8NGG2 359 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 LRRC29Q8WV35 223 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 SDSLQ96GA7 329 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 C11orf1Q9H5F2 150 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 RNF7Q9UBF6 113 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 PFDN2Q9UHV9 154 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 JPT1Q9UK76 154 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 LAMP3Q9UQV4 416 aa6.22□□□□□ -1.41
RGPD1-201ENST00000398193 UNC80Q8N2C7 3258 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 FAM90A26D6RGX4 464 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 MGST3O14880 152 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 GZMHP20718 246 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 UQCC3Q6UW78 93 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 HSD17B13Q7Z5P4 300 aaPredicted RBP6.21□□□□□ -1.41
RGPD1-201ENST00000398193 PDZD9Q8IXQ8 264 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 GLYATL2Q8WU03 294 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 RBPMSQ93062 196 aaKnown RBP6.21□□□□□ -1.41
RGPD1-201ENST00000398193 OR10C1Q96KK4 312 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 ZNF488Q96MN9 340 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.41
RGPD1-201ENST00000398193 UBE2J1Q9Y385 318 aaPredicted RBP6.21□□□□□ -1.41
RGPD1-201ENST00000398193 PHF1O43189 567 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 HKR1P10072 659 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 MUC1P15941 1255 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 FXYD4P59646 89 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 ZNF818PQ6ZRF7 136 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 RELL2Q8NC24 303 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 TOMM40LQ969M1 308 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 SNRNP40Q96DI7 357 aaKnown RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 COA4Q9NYJ1 87 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 IL36RNQ9UBH0 155 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 PRUNE2Q8WUY3 3088 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 GON4LQ3T8J9 2241 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 hCG_1807616A0A1W2PRN6 198 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 K7EPK0 472 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 SPINT2O43291 252 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 PRDX2P32119 198 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 TAS2R30P59541 319 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 COL10A1Q03692 680 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 BAXQ07812 192 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 EIF4EBP1Q13541 118 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 CORO2AQ92828 525 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 PRORYQ9H606 182 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 NCOA6Q14686 2063 aaPredicted RBP6.21□□□□□ -1.42
RGPD1-201ENST00000398193 F2RL2O00254 374 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 VDAC1P21796 283 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 F2RP25116 425 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 COMMD7Q86VX2 200 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 SLC7A5P1Q8MH63 180 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 ARV1Q9H2C2 271 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 PLEKHF2Q9H8W4 249 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 OR6C3Q9NZP0 311 aa6.21□□□□□ -1.42
RGPD1-201ENST00000398193 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 LRRC30A6NM36 301 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 GNMTQ14749 295 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 KRBOX4Q5JUW0 171 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 NCMAPQ5T1S8 102 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 OR2Z1Q8NG97 314 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 OR52M1Q8NGK5 317 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 NINJ1Q92982 152 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 MMP24Q9Y5R2 645 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 MFSD2BA6NFX1 497 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 ERVH48-1M5A8F1 160 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 ST8SIA3O43173 380 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 FGF16O43320 207 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 JTBO76095 146 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 IRF2P14316 349 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 CCKARP32238 428 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 THOC7Q6I9Y2 204 aaKnown RBP6.2□□□□□ -1.42
RGPD1-201ENST00000398193 CD300LFQ8TDQ1 290 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 EDARADDQ8WWZ3 215 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 RDH5Q92781 318 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 C14orf79Q96F83 325 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 SEC22AQ96IW7 307 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 CYTL1Q9NRR1 136 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 NKX6-3A6NJ46 265 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 BET1O15155 118 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 RAB7AP51149 207 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 CATR1Q13166 79 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 RAB32Q13637 225 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 NMSQ5H8A3 153 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 BRICD5Q6PL45 260 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 C20orf204Q6ZNR8 217 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 RNASE6Q93091 150 aaKnown RBP6.2□□□□□ -1.42
RGPD1-201ENST00000398193 PARD6GQ9BYG4 376 aaPredicted RBP6.2□□□□□ -1.42
RGPD1-201ENST00000398193 FAM221AA4D161 298 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 YPEL1O60688 119 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 ZNF737O75373 536 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 FABP6P51161 128 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 SAT2Q96F10 170 aaPredicted RBP6.2□□□□□ -1.42
RGPD1-201ENST00000398193 YPEL2Q96QA6 119 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 EGLN1Q9GZT9 426 aa6.2□□□□□ -1.42
RGPD1-201ENST00000398193 A6NLC8 198 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms