RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 KLK11Q9UBX7 282 aa6.33□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF230Q9UIE0 474 aaPredicted RBP6.33□□□□□ -1.4
LINC00887-201ENST00000397644 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TRAV39A0A0B4J263 110 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 A0A1B0GW55 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TMEM30CPA0ZSE6 113 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 SSX5O60225 188 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 HEXAP06865 529 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L2P0CJ85 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L3P0CJ86 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L4P0CJ87 422 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L5P0CJ88 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L6P0CJ89 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L7P0CJ90 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 SELLP14151 372 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 ERP29P30040 261 aaKnown RBP6.32□□□□□ -1.4
LINC00887-201ENST00000397644 OR3A3P47888 321 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 NPY4RP50391 375 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 SEC61A1P61619 476 aaKnown RBP6.32□□□□□ -1.4
LINC00887-201ENST00000397644 GNB2P62879 340 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 SHEQ5VZ18 495 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 CD276Q5ZPR3 534 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TRIQKQ629K1 86 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF57Q68EA5 555 aaPredicted RBP6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4L9Q6RFH8 374 aaPredicted RBP6.32□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF497Q6ZNH5 498 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TOMM5Q8N4H5 51 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 GVQW1Q8N7I0 195 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TPRX1Q8N7U7 411 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 MAFIPQ8WZ33 124 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 BORCS5Q969J3 196 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 CYYR1Q96J86 154 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 CCDC140Q96MF4 163 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 CCDC32Q9BV29 185 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 TAS2R8Q9NYW2 309 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 DUX4Q9UBX2 424 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 CLN8Q9UBY8 286 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 MTFP1Q9UDX5 166 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 KIF25Q9UIL4 384 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 FLNAP21333 2647 aaKnown RBP6.32□□□□□ -1.4
LINC00887-201ENST00000397644 ARID1AO14497 2285 aa6.32□□□□□ -1.4
LINC00887-201ENST00000397644 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 HIVEP1P15822 2718 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF469Q96JG9 3925 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 LOC105371242A0A075B767 164 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 IGHV4-30-2A0A087WSY4 118 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 hADV38S2A0JD32 116 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ODAMA1E959 279 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 CENPXA8MT69 81 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 TRDCB7Z8K6 153 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 LANCL1O43813 399 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 NAPSAO96009 420 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 CSN2P05814 226 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 GSTT2P0CG29 244 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 SLC25A16P16260 332 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 RCC1P18754 421 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 DTYMKP23919 212 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 HLA-DMAP28067 261 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 GDNFP39905 211 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 LMO4P61968 165 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 RPL31P62899 125 aaKnown RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 SSBP1Q04837 148 aaKnown RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 MEF2CQ06413 473 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 CHRFAM7AQ494W8 412 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ESCO2Q56NI9 601 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 RSBN1Q5VWQ0 802 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 WDR25Q64LD2 544 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF841Q6ZN19 808 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 DNM1P46Q6ZS02 220 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 BTN2A1Q7KYR7 527 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 HOGA1Q86XE5 327 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 LYSMD2Q8IV50 215 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 FGFRL1Q8N441 504 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 TMEM229BQ8NBD8 167 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 BEST4Q8NFU0 473 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 CLDND2Q8NHS1 167 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 MRPL30Q8TCC3 161 aaKnown RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 SMIM4Q8WVI0 70 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 RAB39BQ96DA2 213 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 COQ2Q96H96 371 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 C1orf159Q96HA4 380 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 SDHCQ99643 169 aaPredicted RBP6.31□□□□□ -1.4
LINC00887-201ENST00000397644 DCTN5Q9BTE1 182 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 NCOR1P1Q9H4R4 102 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 ZNF286AQ9HBT8 521 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 Q9N2K0 584 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 C12orf4Q9NQ89 552 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 OR6C3Q9NZP0 311 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 CTSZQ9UBR2 303 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 MGAT4AQ9UM21 535 aa6.31□□□□□ -1.4
LINC00887-201ENST00000397644 TRGV10A0A0A0MS01 117 aa6.3□□□□□ -1.4
LINC00887-201ENST00000397644 TRBV6-6A0A0A6YYG2 114 aa6.3□□□□□ -1.4
LINC00887-201ENST00000397644 A0A1W2PPH5 198 aa6.3□□□□□ -1.4
LINC00887-201ENST00000397644 A0A1W2PQ09 198 aa6.3□□□□□ -1.4
LINC00887-201ENST00000397644 MEX3AA1L020 520 aaKnown RBP6.3□□□□□ -1.4
LINC00887-201ENST00000397644 VWC2LB2RUY7 222 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms