RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 GCNT2Q8N0V5 402 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 OR5AS1Q8N127 324 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TMEM156Q8N614 296 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 NUDT10Q8NFP7 164 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 OR5H2Q8NGV7 314 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 FNDC9Q8TBE3 224 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ERGIC1Q969X5 290 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 TMEM230Q96A57 120 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 PTX4Q96A99 478 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 ZNF845Q96IR2 970 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 TP53RKQ96S44 253 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 GPHA2Q96T91 129 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 R4GN57 208 aa4.36□□□□□ -1.71
SSR1-202ENST00000397511 RP1L1Q8IWN7 2480 aaPredicted RBP4.36□□□□□ -1.71
SSR1-202ENST00000397511 FIGNL2A6NMB9 653 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 K7N7A8 449 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SMPD2O60906 423 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 IGHMP01871 453 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 UMODP07911 640 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 TMEM225BP0DP42 221 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 HIST1H1DP16402 221 aaKnown RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 FPR2P25090 351 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 RBMXP38159 391 aaKnown RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 CXCL12P48061 93 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 PDLIM4P50479 330 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 ASCL1P50553 236 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SPEM2Q0P670 501 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 TMEM241Q24JQ0 296 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SNAI3Q3KNW1 292 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SLC25A24Q6NUK1 477 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 Q7L0L9 218 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 LYPD6Q86Y78 171 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 FAM169BQ8N8A8 192 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 CADM4Q8NFZ8 388 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OR5L2Q8NGL0 311 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OR14L1PQ8NHC6 308 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 HAS2Q92819 552 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 CORO2AQ92828 525 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SPACA9Q96E40 222 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 REEP6Q96HR9 211 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 TECTBQ96PL2 329 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SH3BGRL3Q9H299 93 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.35□□□□□ -1.71
SSR1-202ENST00000397511 C1orf123Q9NWV4 160 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SRPK3Q9UPE1 567 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 LIPGQ9Y5X9 500 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 COL4A2P08572 1712 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 SVILO95425 2214 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 E5RGE8 158 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 NPIPA2E9PIF3 369 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 NPIPA3F8WFD2 350 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 HSPB6O14558 160 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 GPR137BO60478 399 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 TRAPPC6AO75865 159 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 NXPH3O95157 252 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 PDGFBP01127 241 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 PPBPP02775 128 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 CCL2P13500 99 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 B4GALT1P15291 398 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 MDKP21741 143 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 CEACAM8P31997 349 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 HIST1H3AP68431 136 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 HLA-BQ31612 363 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 WDR74Q6RFH5 385 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 ZNF66Q6ZN08 573 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 P4HA3Q7Z4N8 544 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 GBGT1Q8N5D6 347 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OR2M3Q8NG83 312 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OR13G1Q8NGZ3 307 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 KCNG3Q8TAE7 436 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 EAF1Q96JC9 268 aaPredicted RBP4.35□□□□□ -1.71
SSR1-202ENST00000397511 LYZL4Q96KX0 146 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 C20orf144Q9BQM9 153 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OR10A2Q9H208 303 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 PLEKHJ1Q9NW61 149 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 WNT16Q9UBV4 365 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 OSGIN2Q9Y236 505 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 MGAQ8IWI9 3026 aa4.35□□□□□ -1.71
SSR1-202ENST00000397511 TMEM14DPA8MWL7 114 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 CSNK1A1P48729 337 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 MTCP1P56278 107 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 SUPT4H1P63272 117 aaKnown RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 SRYQ05066 204 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ZP4Q12836 540 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ICAM4Q14773 271 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 PCK2Q16822 640 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 ZNF506Q5JVG8 444 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 GPR157Q5UAW9 335 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 OR8G2PQ6IF36 304 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 OR5T1Q8NG75 326 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 MAFAQ8NHW3 353 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 DNASE2BQ8WZ79 361 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 SLC35E1Q96K37 410 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 C1orf147Q96MC9 270 aaPredicted RBP4.34□□□□□ -1.71
SSR1-202ENST00000397511 TBX15Q96SF7 602 aa4.34□□□□□ -1.71
SSR1-202ENST00000397511 VPS25Q9BRG1 176 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms