RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 HTR1AP08908 422 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 ECI1P42126 302 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 GPR12P47775 334 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 INSL3P51460 131 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 LUMP51884 338 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 NANOS3P60323 173 aaKnown RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 DIAPH2-AS1Q14236 149 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 ATXN7L3Q14CW9 347 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 KISS1Q15726 138 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 ATP6AP1Q15904 470 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 PAN3Q58A45 887 aaKnown RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 MOB3BQ86TA1 216 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 SERPINA12Q8IW75 414 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 Q8NFD4 153 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR8H1Q8NGG4 311 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR52M1Q8NGK5 317 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR5D18Q8NGL1 313 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR13C3Q8NGS6 347 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR13C9Q8NGT0 318 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 OR2T10Q8NGZ9 312 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 RFESDQ8TAC1 157 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 CNIH3Q8TBE1 160 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 LEAP2Q969E1 77 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 SPACA5Q96QH8 159 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 NR1H4Q96RI1 486 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 PRR25Q96S07 402 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 MYCBPQ99417 103 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-208ENST00000397204 CHCHD6Q9BRQ6 235 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 GABARAPL1Q9H0R8 117 aa6.86□□□□□ -1.31
CAPN3-208ENST00000397204 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 DAPL1A0PJW8 107 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 OR4C45A6NMZ5 311 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 J3QRE1 110 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 HSD17B6O14756 317 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 SLC16A6O15403 523 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 IGHG4P01861 327 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 VAMP1P23763 118 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 FASP25445 335 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 CD1BP29016 333 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 POLR2IP36954 125 aaKnown RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 GLP1RP43220 463 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 ZP1P60852 638 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 IL13RA2Q14627 380 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 MLANAQ16655 118 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 SLC25A30Q5SVS4 291 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 ASCL4Q6XD76 172 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 IZUMO1Q8IYV9 350 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 PARP16Q8N5Y8 322 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 LINC00311Q8N616 119 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 Q8N6K4 173 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 C8orf31Q8N9H6 132 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 Q8N9W7 124 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 PXT1Q8NFP0 134 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 OR10AC1Q8NH08 325 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 MUC7Q8TAX7 377 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 CPNE2Q96FN4 548 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 MRPL48Q96GC5 212 aaKnown RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 CIB1Q99828 191 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 ASCL2Q99929 193 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 RIBC2Q9H4K1 309 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 PLSCR3Q9NRY6 295 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 FAM118AQ9NWS6 357 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 CHCHD3Q9NX63 227 aaKnown RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF580Q9UK33 172 aa6.85□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF256Q9Y2P7 627 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
CAPN3-208ENST00000397204 J3QLW9 94 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 HSPB6O14558 160 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 SULT1B1O43704 296 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 IGF1P05019 195 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 HCKP08631 526 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 OR5H8P0DN80 308 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF19P17023 458 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 GNG10P50151 68 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 FHL3Q13643 280 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ALKBH1Q13686 389 aaKnown RBP6.84□□□□□ -1.31
CAPN3-208ENST00000397204 LTC4SQ16873 150 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF260Q3ZCT1 412 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 Q3ZCU0 254 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ZNF691Q5VV52 312 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 RSBN1Q5VWQ0 802 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-208ENST00000397204 MEDAGQ5VYS4 303 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ACBD7Q8N6N7 88 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 OR51A4Q8NGJ6 313 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 MRGPRDQ8TDS7 321 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 C4orf3Q8WVX3 66 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 ST6GALNAC6Q969X2 333 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 PELI1Q96FA3 418 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 S1PR3Q99500 378 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 RASL11BQ9BPW5 248 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 GABARAPL3Q9BY60 117 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 AP4S1Q9Y587 144 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 SMAD5-AS1Q9Y6J3 95 aa6.84□□□□□ -1.31
CAPN3-208ENST00000397204 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 DNAH7Q8WXX0 4024 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 IGHV3-72A0A0B4J1Y9 119 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 A0A1W2PPE3 182 aa6.83□□□□□ -1.32
CAPN3-208ENST00000397204 SNTNA6NMZ2 147 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms