RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 OR51B2Q9Y5P1 312 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 SPATA31D1Q6ZQQ2 1576 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 LAMTOR1Q6IAA8 161 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 RP1L1Q8IWN7 2480 aaPredicted RBP10.87□□□□□ -0.67
SMU1-201ENST00000397149 GPX1P07203 203 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 PRDX2P32119 198 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 ST3GAL2Q16842 350 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 SAPCD1Q5SSQ6 148 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 PRSS42Q7Z5A4 293 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 ZNF384Q8TF68 577 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
SMU1-201ENST00000397149 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 HSPB7Q9UBY9 170 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 POMT2Q9UKY4 750 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.87□□□□□ -0.67
SMU1-201ENST00000397149 DXOO77932 396 aaKnown RBP10.87□□□□□ -0.67
SMU1-201ENST00000397149 NTN1O95631 604 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 OTOSQ8NHW6 89 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 FRRS1LQ9P0K9 344 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 H3BTX0 84 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 GPX2P18283 190 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 RAB9AP51151 201 aa10.87□□□□□ -0.67
SMU1-201ENST00000397149 TMEM210A6NLX4 147 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 LINC01565O15544 149 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 SOD3P08294 240 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 PSMG3Q9BT73 122 aaPredicted RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 PROB1E7EW31 1015 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 THY1P04216 161 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 MALP21145 153 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 ACVR1Q04771 509 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 ACER2Q5QJU3 275 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 CBLN2Q8IUK8 224 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 SYS1Q8N2H4 156 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 PHLDA1Q8WV24 401 aaPredicted RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 ELOA3CA0A087WX78 387 aaPredicted RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 ZAR1LA6NP61 321 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 J3QR06 171 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 COL2A1P02458 1487 aaPredicted RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 ANOS1P23352 680 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 TOX2Q96NM4 488 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 JKAMPQ9P055 326 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 DCCP43146 1447 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 TRIP6Q15654 476 aaKnown RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 LSM10Q969L4 123 aaKnown RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 ZBP1Q9H171 429 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 PDCD6O75340 191 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 GPR6P46095 362 aaPredicted RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 GAPTQ8N292 157 aa10.86□□□□□ -0.67
SMU1-201ENST00000397149 MRPL16Q9NX20 251 aaKnown RBP10.86□□□□□ -0.67
SMU1-201ENST00000397149 MPC2O95563 127 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 PGA5P0DJD9 388 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 PRELID3AQ96N28 172 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 PRRC2BQ5JSZ5 2229 aaKnown RBP10.85□□□□□ -0.67
SMU1-201ENST00000397149 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 TMEM127O75204 238 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 CXorf1O96002 111 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 TYMSP04818 313 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 JMJD6Q6NYC1 403 aaPredicted RBP10.85□□□□□ -0.67
SMU1-201ENST00000397149 FAHD1Q6P587 224 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 ANGPTL4Q9BY76 406 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 ALX4Q9H161 411 aaPredicted RBP10.85□□□□□ -0.67
SMU1-201ENST00000397149 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 WNT9BO14905 357 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 HYAL1Q12794 435 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 RNF7Q9UBF6 113 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 MIOXQ9UGB7 285 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 OR10AC1Q8NH08 325 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 ITLN2Q8WWU7 325 aaPredicted RBP10.85□□□□□ -0.67
SMU1-201ENST00000397149 CCL28Q9NRJ3 127 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 SLC25A10Q9UBX3 287 aaPredicted RBP10.85□□□□□ -0.67
SMU1-201ENST00000397149 NUP205Q92621 2012 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 TRAV8-6A0A0B4J262 113 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 hCG_38984A0A1B0GV85 526 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 MPLP40238 635 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 Q6ZS52 159 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 ZDHHC22Q8N966 263 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 ZG16BQ96DA0 208 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 TRDCB7Z8K6 153 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 TEPPQ6URK8 271 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 UNQ5815/PRO19632Q6UWF5 114 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 RHNO1Q9BSD3 238 aa10.85□□□□□ -0.67
SMU1-201ENST00000397149 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
SMU1-201ENST00000397149 TUBD1Q9UJT1 453 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 TCRBV16S1A1N1A0A5B0 115 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 ZIC3O60481 467 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 HYPMO75409 117 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 ISL1P61371 349 aa10.84□□□□□ -0.67
SMU1-201ENST00000397149 DLEU7Q6UYE1 221 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms