RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 LIN37Q96GY3 246 aaPredicted RBP10.83□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF48Q96MX3 618 aaPredicted RBP10.83□□□□□ -0.68
SLC28A1-203ENST00000394573 PELI2Q9HAT8 420 aa10.83□□□□□ -0.68
SLC28A1-203ENST00000394573 PPIAL4EA0A075B759 164 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 PPIAL4CA0A0B4J2A2 164 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 DPRXA6NFQ7 191 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 PPIAL4DF5H284 164 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TRAF3IP2O43734 574 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 APBA3O96018 575 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 RENP00797 406 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 PPIAL4FP0DN26 164 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 FBLP22087 321 aaKnown RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 OTX2P32243 289 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 PSEN2P49810 448 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TAS2R46P59540 309 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 WDR74Q6RFH5 385 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MRGPRGQ86SM5 289 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 HAPLN4Q86UW8 402 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 OR2M7Q8NG81 312 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MRPL30Q8TCC3 161 aaKnown RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NAA38Q9BRA0 125 aaKnown RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TMEM204Q9BSN7 226 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 PLEKHF2Q9H8W4 249 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MMP17Q9ULZ9 603 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TDRD6O60522 2096 aaKnown RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 SPAARA0A1B0GVQ0 90 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NUDT3O95989 172 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MT-CO2P00403 227 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CELA3BP08861 270 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NTF3P20783 257 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NTSR1P30989 418 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 SRP14P37108 136 aaKnown RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 RRADP55042 308 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TMEM267Q0VDI3 215 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TCTN1Q2MV58 587 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 TMEM144Q7Z5S9 345 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 OR51T1Q8NGJ9 327 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CPT1CQ8TCG5 803 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NKX2-4Q9H2Z4 354 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NAA60Q9H7X0 242 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 A0A1W2PPV9 198 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 KIAA1324LA8MWY0 1029 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 GPX1P07203 203 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 C1QTNF9P0C862 333 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 BLVRBP30043 206 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 OPRM1P35372 400 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CD226Q15762 336 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 LRRC10Q5BKY1 277 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 ZIC4Q8N9L1 334 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF501Q96CX3 271 aaPredicted RBP10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 NUS1Q96E22 293 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 ATP6V0BQ99437 205 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 GPER1Q99527 375 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CHODLQ9H9P2 273 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 CLEC1BQ9P126 229 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
SLC28A1-203ENST00000394573 IGKV1D-42A0A075B6H8 117 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 FAM166BA8MTA8 275 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF207O43670 478 aaKnown RBP10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 CLEC3AO75596 197 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 TIAF1O95411 115 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 MRPS6P82932 125 aaKnown RBP10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 PSG4Q00888 419 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 CCL15Q16663 113 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 FDX2Q6P4F2 183 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 C9orf172C9J069 976 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 LATO43561 262 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF253O75346 499 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 GATA2P23769 480 aaPredicted RBP10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ARG2P78540 354 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 MGAT2Q10469 447 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ZNF658BQ4V348 819 aaPredicted RBP10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 SPIN3Q5JUX0 258 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 LIAT1Q6ZQX7 453 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 UBALD2Q8IYN6 164 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 MUC15Q8N387 334 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 VN1R2Q8NFZ6 395 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 HDAC8Q9BY41 377 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 HCFC2Q9Y5Z7 792 aa10.81□□□□□ -0.68
SLC28A1-203ENST00000394573 ATG2BQ96BY7 2078 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 ALG1L2C9J202 215 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 SPINK4O60575 86 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 FUT6P51993 359 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 SELENOVP59797 346 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 VASH2Q86V25 355 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 LHX4Q969G2 390 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 P2RX4Q99571 388 aa10.8□□□□□ -0.68
SLC28A1-203ENST00000394573 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms