RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 HINT1P49773 126 aaPredicted RBP7.02□□□□□ -1.29
LIMS1-203ENST00000393310 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.02□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF793Q6ZN11 406 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 SERPINA11Q86U17 422 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 SIGLECL1Q8N7X8 197 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 OR2M3Q8NG83 312 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 OR10AD1Q8NGE0 317 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 HSH2DQ96JZ2 352 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 SYT3Q9BQG1 590 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 POLR2J2Q9GZM3 115 aaKnown RBP7.02□□□□□ -1.29
LIMS1-203ENST00000393310 SLC7A7Q9UM01 511 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 VPS13CQ709C8 3753 aa7.02□□□□□ -1.29
LIMS1-203ENST00000393310 HELZ2Q9BYK8 2649 aaKnown RBP7.02□□□□□ -1.29
LIMS1-203ENST00000393310 FAM183AA6NL82 134 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 B5MCH6 92 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TSPAN2O60636 221 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF205O95201 554 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 BCHEP06276 602 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 LINC00032P0C843 101 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 EIF2B1Q14232 305 aaKnown RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TMEM244Q5VVB8 128 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 PAQR6Q6TCH4 344 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 LDLRAD3Q86YD5 345 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR4B1Q8NGF8 309 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR51T1Q8NGJ9 327 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR4D5Q8NGN0 318 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SSMEM1Q8WWF3 244 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 PTH2Q96A98 100 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 NEIL1Q96FI4 390 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CST11Q9H112 138 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR52D1Q9H346 318 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF337Q9Y3M9 751 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TMED3Q9Y3Q3 217 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TRAV8-7A0A075B6U6 113 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 C9orf170A2RU37 121 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CORTO00230 105 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 GABRPO00591 440 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 MPZL2O60487 215 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CDC14BO60729 498 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 NKX2-2O95096 273 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 NUDT3O95989 172 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF708P17019 499 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 MARCKSL1P49006 195 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 LRRC37A5PQ49AS3 106 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CCSMST1Q4G0I0 132 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF774Q6NX45 483 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 C10orf126Q8N4M7 172 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR4K15Q8NH41 348 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 DOK4Q8TEW6 326 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 RGP1Q92546 391 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ESAMQ96AP7 390 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TM4SF19Q96DZ7 209 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SIRT4Q9Y6E7 314 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TRAV36DV7A0A075B6V5 113 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 UMAD1C9J7I0 102 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SLC16A7O60669 478 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF682O95780 498 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 FGF2P09038 288 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 LMO1P25800 156 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR3A4PP47883 348 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 MRPS11P82912 194 aaKnown RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 FUT7Q11130 342 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF791Q3KP31 576 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 FAM120AOSQ5T036 256 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZCCHC23Q6ZST2 131 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 H1FNTQ75WM6 255 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CMTM1Q8IZ96 169 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 FADS6Q8N9I5 356 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SLC26A10Q8NG04 563 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 WDR34Q96EX3 536 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 FAM110AQ9BQ89 295 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF355PQ9NSJ1 428 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SLAMF8Q9P0V8 285 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 RIMS3Q9UJD0 308 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TIMM10BQ9Y5J6 103 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SPTBP11277 2137 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 DNAJC13O75165 2243 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 NAP1L6A6NFF2 107 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 DUS4LO95620 317 aaKnown RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 CD1DP15813 335 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ATP1B3P54709 279 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 RBX1P62877 108 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SSBP2P81877 361 aaPredicted RBP7.01□□□□□ -1.29
LIMS1-203ENST00000393310 SSX1Q16384 188 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 ZFAND6Q6FIF0 208 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TRAPPC6BQ86SZ2 158 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR10G4Q8NGN3 311 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR1N2Q8NGR9 330 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 OR51I2Q9H344 312 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TNFRSF19Q9NS68 423 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 GALPQ9UBC7 116 aa7.01□□□□□ -1.29
LIMS1-203ENST00000393310 TRAV39A0A0B4J263 110 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 F5H768 121 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 GPANK1O95872 356 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 IGHV3-9P01782 118 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 MGMTP16455 207 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 ZBTB25P24278 435 aa7□□□□□ -1.29
LIMS1-203ENST00000393310 NFYBP25208 207 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms