RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 COQ10BQ9H8M1 238 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 WDR76Q9H967 626 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 MEAF6Q9HAF1 191 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 PDE7BQ9NP56 450 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TAS2R13Q9NYV9 303 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TAS2R10Q9NYW0 307 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 KCNIP1Q9NZI2 227 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 SPATA7Q9P0W8 599 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 MTRRQ9UBK8 725 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NPIPA1Q9UND3 350 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TNFSF18Q9UNG2 199 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 FADS3Q9Y5Q0 445 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 F11RQ9Y624 299 aaKnown RBP-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 NISCHQ9Y2I1 1504 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ROCK1Q13464 1354 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ARAP2Q8WZ64 1704 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 ABCA3Q99758 1704 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 IFT172Q9UG01 1749 aa-1.88□□□□□ -2.71
RNU6-540P-201ENST00000384622 TTC41PQ6P2S7 1318 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 THOC2Q8NI27 1593 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GVQW2A0A096LPI5 108 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRBV9A0A0B4J1U6 114 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRBV6-4A0A1B0GX49 114 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 A0A1W2PPH5 198 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM235A6NFC5 223 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GPR89AB7ZAQ6 455 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MCRIP1C9JLW8 97 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 E9PBE3 544 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PSMD12O00232 456 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 IPO8O15397 1037 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 DENRO43583 198 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDC40O60508 579 aaKnown RBP eCLIP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 DCTN3O75935 186 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2C1O95371 312 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 YEATS4O95619 227 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 LTAP01374 205 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TYMSP04818 313 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 HEXBP07686 556 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR5G3P0C626 314 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GPR89BP0CG08 455 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ALOX5APP20292 161 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PMCHP20382 165 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 HLA-DMBP28068 263 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERP29P30040 261 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GCH1P30793 250 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GTF2H1P32780 548 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 HSD17B3P37058 310 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 RGS2P41220 211 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MAP3K8P41279 467 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR1G1P47890 313 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 HTR5AP47898 357 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TUBP50607 506 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCNG1P51959 295 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MTPNP58546 118 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PPP1CBP62140 327 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC35A1P78382 337 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERHP84090 104 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CAMK2DQ13557 499 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ELOBQ15370 118 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MED22Q15528 200 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ACSF3Q4G176 576 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 LUZP6Q538Z0 58 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PYCR3Q53H96 274 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 C1orf189Q5VU69 101 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CST9LP1Q5W188 147 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 NOXRED1Q6NXP6 359 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ENPP6Q6UWR7 440 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 C11orf57Q6ZUT1 292 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 RPS27LQ71UM5 84 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GPR141Q7Z602 305 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 KBTBD6Q86V97 674 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERO1BQ86YB8 467 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 SMC5Q8IY18 1101 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GABRG1Q8N1C3 465 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 BBS5Q8N3I7 341 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 LIX1Q8N485 282 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CSGALNACT2Q8N6G5 542 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PRELID2Q8N945 189 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 NHLRC2Q8NBF2 726 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR2K2Q8NGT1 345 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR52J3Q8NH60 311 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 GDAP1Q8TB36 358 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 METTL6Q8TCB7 284 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ITLN2Q8WWU7 325 aaPredicted RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 IMP4Q96G21 291 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 FCRL1Q96LA6 429 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 VPS35Q96QK1 796 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ATP6V0BQ99437 205 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CPNE1Q99829 537 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 APOOQ9BUR5 198 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMED9Q9BVK6 235 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 PCGF6Q9BYE7 350 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR52A5Q9H2C5 316 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CCDC68Q9H2F9 335 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MCCC2Q9HCC0 563 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZCCHC17Q9NP64 241 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDC42SE2Q9NRR3 84 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 NDUFB11Q9NX14 153 aa-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 LYARQ9NX58 379 aaKnown RBP-1.89□□□□□ -2.71
RNU6-540P-201ENST00000384622 MS4A12Q9NXJ0 267 aa-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms