RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 SPACA1Q9HBV2 294 aa14.55□□□□□ -0.08
CD9-204ENST00000382519 NKX1-2Q9UD57 310 aaPredicted RBP14.55□□□□□ -0.08
CD9-204ENST00000382519 SH2D7A6NKC9 451 aaPredicted RBP14.54□□□□□ -0.08
CD9-204ENST00000382519 AIPO00170 330 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 PIN1P1O15428 100 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 OPN1MWP04001 364 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 CD1AP06126 327 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 CDK1P06493 297 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 LPLP06858 475 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 SNRNP70P08621 437 aaKnown RBP14.54□□□□□ -0.08
CD9-204ENST00000382519 FAM106CPP0CH98 169 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 OPN1MW2P0DN77 364 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 OPN1MW3P0DN78 364 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 GZMHP20718 246 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 GABPB1Q06547 395 aaPredicted RBP14.54□□□□□ -0.08
CD9-204ENST00000382519 HES1Q14469 280 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 C9orf152Q5JTZ5 239 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 NDUFA11Q86Y39 141 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 DRAM1Q8N682 238 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 NKAIN3Q8N8D7 197 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 ARL11Q969Q4 196 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 OCSTAMPQ9BR26 566 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 BANF2Q9H503 90 aa14.54□□□□□ -0.08
CD9-204ENST00000382519 A0A1W2PPI3 338 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 MCRIP1C9JLW8 97 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 PTGES3LE9PB15 166 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 SDCBPO00560 298 aaPredicted RBP14.53□□□□□ -0.08
CD9-204ENST00000382519 CRTAPO75718 401 aaPredicted RBP14.53□□□□□ -0.08
CD9-204ENST00000382519 MGMTP16455 207 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 AQP4P55087 323 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 DIAPH2-AS1Q14236 149 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 RAB12Q6IQ22 244 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 ZNF497Q6ZNH5 498 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 SLC16A12Q6ZSM3 486 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 CDH26Q8IXH8 852 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 OR5AU1Q8NGC0 362 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 MYDGFQ969H8 173 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 R3HDM4Q96D70 268 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 MRPS24Q96EL2 167 aaKnown RBP14.53□□□□□ -0.08
CD9-204ENST00000382519 SELENOIQ9C0D9 397 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 SCN3BQ9NY72 215 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 RCC2Q9P258 522 aaKnown RBP14.53□□□□□ -0.08
CD9-204ENST00000382519 MOB4Q9Y3A3 225 aa14.53□□□□□ -0.08
CD9-204ENST00000382519 IGHV3-43A0A0B4J1X8 118 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 A0A1W2PRX2 142 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 C15orf65H3BRN8 121 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 M0QZK8 103 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 HSD17B6O14756 317 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 IGHV3-43DP0DP04 118 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 RAB7AP51149 207 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 EMX1Q04741 257 aaPredicted RBP14.52□□□□□ -0.09
CD9-204ENST00000382519 INSL4Q14641 139 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 C6orf141Q5SZD1 244 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 CENPVQ7Z7K6 275 aaPredicted RBP14.52□□□□□ -0.09
CD9-204ENST00000382519 TMEM104Q8NE00 496 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 OR4F17Q8NGA8 305 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 OR4F4Q96R69 305 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 TMED9Q9BVK6 235 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 ETAA1Q9NY74 926 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 TRAPPC2LQ9UL33 140 aa14.52□□□□□ -0.09
CD9-204ENST00000382519 G3V4G9 280 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 ORC5O43913 435 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 MT-ND4P03905 459 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 AMY1AP04745 511 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 AMY2AP04746 511 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 TMEM11P17152 192 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 GPR50Q13585 617 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 ACSM3Q53FZ2 586 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 OR8H3Q8N146 312 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 OR4K15Q8NH41 348 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 NRG4Q8WWG1 115 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 FAM46BQ96A09 425 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 UQCC2Q9BRT2 126 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 GFOD1Q9NXC2 390 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 PEX16Q9Y5Y5 336 aa14.51□□□□□ -0.09
CD9-204ENST00000382519 ADARB2-AS1A8MUL3 147 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 VHLP40337 213 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 REG1BP48304 166 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 HNF4GQ14541 408 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 SPHARQ15513 63 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 MED22Q15528 200 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 RBM48Q5RL73 367 aaKnown RBP14.5□□□□□ -0.09
CD9-204ENST00000382519 FAM27D1Q5T7N8 215 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 SYT6Q5T7P8 510 aaPredicted RBP14.5□□□□□ -0.09
CD9-204ENST00000382519 RNLSQ5VYX0 342 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 LYPD6Q86Y78 171 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 THNSL2Q86YJ6 484 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 PRR18Q8N4B5 295 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 MS4A15Q8N5U1 240 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 OR52M1Q8NGK5 317 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 SGCDQ92629 289 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 Q96M66 194 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 CST11Q9H112 138 aa14.5□□□□□ -0.09
CD9-204ENST00000382519 LSM2Q9Y333 95 aaKnown RBP14.5□□□□□ -0.09
CD9-204ENST00000382519 FAM90A10PA6NDY2 464 aa14.49□□□□□ -0.09
CD9-204ENST00000382519 FAM90A18PA6NE21 464 aa14.49□□□□□ -0.09
CD9-204ENST00000382519 FAM90A16PA6NEW6 464 aa14.49□□□□□ -0.09
CD9-204ENST00000382519 FAM90A20PA6NIJ5 464 aa14.49□□□□□ -0.09
CD9-204ENST00000382519 FAM90A7PA6NKC0 464 aa14.49□□□□□ -0.09
CD9-204ENST00000382519 FAM90A9PA6NNJ1 464 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms