RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 OR2W1Q9Y3N9 320 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 SHANK1Q9Y566 2161 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 OR1A1Q9P1Q5 309 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 DNPH1O43598 174 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 P2RY4P51582 365 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 RBM11P57052 281 aaKnown RBP14.93□□□□□ -0.02
SGCB-201ENST00000381431 BPIFB3P59826 476 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 FOXO1Q12778 655 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 SLC26A1Q9H2B4 701 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 AKIRIN1Q9H9L7 192 aaPredicted RBP14.93□□□□□ -0.02
SGCB-201ENST00000381431 DOK5Q9P104 306 aa14.93□□□□□ -0.02
SGCB-201ENST00000381431 RAMP1O60894 148 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 HAND1O96004 215 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 ISG15P05161 165 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 PSG2P11465 335 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 FOXC1Q12948 553 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 FAM206AQ9NX38 181 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 SCN4AP35499 1836 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 FABP1P07148 127 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 GALR1P47211 349 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 IGLV3-21P80748 117 aaPredicted RBP14.92□□□□□ -0.02
SGCB-201ENST00000381431 MDP1Q86V88 176 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 LHFPL5Q8TAF8 219 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 ATP5SQ99766 215 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 RGPD3A6NKT7 1758 aaPredicted RBP14.92□□□□□ -0.02
SGCB-201ENST00000381431 ERVS71-1P61550 626 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 IGFBP7Q16270 282 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 SNAI3Q3KNW1 292 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 TMEM147Q9BVK8 224 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 G6PC2Q9NQR9 355 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 TRAPPC1Q9Y5R8 145 aa14.92□□□□□ -0.02
SGCB-201ENST00000381431 TP53BP1Q12888 1972 aaPredicted RBP14.91□□□□□ -0.02
SGCB-201ENST00000381431 OPRK1P41145 380 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 CSN1S1P47710 185 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 SULT1A1P50225 295 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 AESQ08117 197 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 BSXQ3C1V8 233 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 LRRC10Q5BKY1 277 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 FBXW9Q5XUX1 488 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 SSMEM1Q8WWF3 244 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 TMEM230Q96A57 120 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 OR10C1Q96KK4 312 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 CXXC4Q9H2H0 198 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 SPAARA0A1B0GVQ0 90 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 NPIPB9F8W1W9 429 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 HSBP1O75506 76 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 CYC1P08574 325 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 MUC1P15941 1255 aaPredicted RBP14.91□□□□□ -0.02
SGCB-201ENST00000381431 S100A7P31151 101 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 TMEM50BP56557 158 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 DTD1Q8TEA8 209 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 PRO1933Q9H354 126 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 IFT22Q9H7X7 185 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 LOC101059948A0A1B0GTJ6 334 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 A0A1W2PR77 199 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 RPL36A-HNRNPH2H7BZ11 118 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 SCTP09683 121 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 ZNF880Q6PDB4 577 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 PUSL1Q8N0Z8 303 aaKnown RBP14.91□□□□□ -0.02
SGCB-201ENST00000381431 SPSB2Q99619 263 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 NRIP2Q9BQI9 281 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 LTBP1Q14766 1721 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 A0A087WV48 116 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 FAM74A7A6NL05 159 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 CNN1P51911 297 aaKnown RBP14.91□□□□□ -0.02
SGCB-201ENST00000381431 ANKRD55Q3KP44 614 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 FAM74A3Q4VXF1 159 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 TEX30Q5JUR7 227 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 R3HDM4Q96D70 268 aa14.91□□□□□ -0.02
SGCB-201ENST00000381431 AURKAIP1Q9NWT8 199 aaPredicted RBP14.91□□□□□ -0.02
SGCB-201ENST00000381431 HLA-GP17693 338 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 G6PCP35575 357 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 MRPS11P82912 194 aaKnown RBP14.9□□□□□ -0.02
SGCB-201ENST00000381431 IFI6P09912 130 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 SEC11BP0C7V7 166 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 SPP1P10451 314 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 UBE2V2Q15819 145 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 SMUG1Q53HV7 270 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 NEIL1Q96FI4 390 aaPredicted RBP14.9□□□□□ -0.02
SGCB-201ENST00000381431 NPAS1Q99742 590 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 ANGPTL4Q9BY76 406 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 TMPRSS5Q9H3S3 457 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 ACTL6AO96019 429 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 AQP3Q92482 292 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 NAT8BQ9UHF3 227 aa14.9□□□□□ -0.02
SGCB-201ENST00000381431 PDCD11Q14690 1871 aaKnown RBP14.89□□□□□ -0.03
SGCB-201ENST00000381431 IGKV1D-43A0A0B4J1Z2 117 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 CRYM-AS1A6NIL9 109 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 TMPRSS2O15393 492 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 MEOX2P50222 304 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 FAM78BQ5VT40 261 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 MOGAT3Q86VF5 341 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 TMEM251Q8N6I4 163 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 TTTY12Q9BZ98 90 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 PMCHP20382 165 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 DLK1P80370 383 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 VMA21Q3ZAQ7 101 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 SERTM2A0A1B0GWG4 89 aa14.89□□□□□ -0.03
SGCB-201ENST00000381431 DBX1A6NMT0 343 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms