RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LCNL1Q6ZST4 164 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 AHSA2Q719I0 299 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 MOB3BQ86TA1 216 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 MYCBPQ99417 103 aaPredicted RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 LINC00574Q9H8X3 128 aa12.58□□□□□ -0.4
VCX3A-201ENST00000381089 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 EXOGQ9Y2C4 368 aaKnown RBP12.58□□□□□ -0.4
VCX3A-201ENST00000381089 DAPL1A0PJW8 107 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 CCRL2O00421 344 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 FADS2O95864 444 aaKnown RBP12.57□□□□□ -0.4
VCX3A-201ENST00000381089 RPLP1P05386 114 aaKnown RBP12.57□□□□□ -0.4
VCX3A-201ENST00000381089 ELANEP08246 267 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 GPR12P47775 334 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 ZNF816Q0VGE8 651 aaPredicted RBP12.57□□□□□ -0.4
VCX3A-201ENST00000381089 RAB40BQ12829 278 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 CDK5R1Q15078 307 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 KISS1Q15726 138 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 UTF1Q5T230 341 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 Q8NFD4 153 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 OR5D14Q8NGL3 314 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 OR2T10Q8NGZ9 312 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 GGHQ92820 318 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 ASCL2Q99929 193 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 ABCG5Q9H222 651 aa12.57□□□□□ -0.4
VCX3A-201ENST00000381089 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 J3QRE1 110 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 MAGEB3O15480 346 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 DENRO43583 198 aaKnown RBP12.56□□□□□ -0.4
VCX3A-201ENST00000381089 SULT1B1O43704 296 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 VDAC1P21796 283 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 IL3RAP26951 378 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 CHATP28329 748 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
VCX3A-201ENST00000381089 EBI3Q14213 229 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 IL13RA2Q14627 380 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 DEFB136Q30KP8 78 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 NKAPLQ5M9Q1 402 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 SERPINA12Q8IW75 414 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 IZUMO1Q8IYV9 350 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 ACBD7Q8N6N7 88 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 EAF1Q96JC9 268 aaPredicted RBP12.56□□□□□ -0.4
VCX3A-201ENST00000381089 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 PSORS1C1Q9UIG5 152 aa12.56□□□□□ -0.4
VCX3A-201ENST00000381089 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
VCX3A-201ENST00000381089 STAB2Q8WWQ8 2551 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 IRGMA1A4Y4 181 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 INSL3P51460 131 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 ZP1P60852 638 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 PAX5Q02548 391 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 MED21Q13503 144 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 ELP2Q6IA86 826 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 LHFPL3Q86UP9 236 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 OR51A4Q8NGJ6 313 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 OR10AC1Q8NH08 325 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 C4orf3Q8WVX3 66 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 RNF166Q96A37 237 aaPredicted RBP12.55□□□□□ -0.4
VCX3A-201ENST00000381089 TMEM80Q96HE8 168 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 GPER1Q99527 375 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 ALG8Q9BVK2 526 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 FGF20Q9NP95 211 aaPredicted RBP12.55□□□□□ -0.4
VCX3A-201ENST00000381089 PLCXD1Q9NUJ7 323 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
VCX3A-201ENST00000381089 SCN3BQ9NY72 215 aa12.55□□□□□ -0.4
VCX3A-201ENST00000381089 TRAV24A0A0B4J272 114 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 LINC01548A6NM66 108 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 J3QLW9 94 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 LY86O95711 162 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 OR5H8P0DN80 308 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 ZNF19P17023 458 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 MYL12AP19105 171 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 GZMHP20718 246 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 SSTR5P35346 364 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 REG1BP48304 166 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 ALKBH1Q13686 389 aaKnown RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 RSU1Q15404 277 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 ZNF260Q3ZCT1 412 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 RSBN1Q5VWQ0 802 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 OR8H1Q8NGG4 311 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 MUC7Q8TAX7 377 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 CHCHD3Q9NX63 227 aaKnown RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 ERVK13-1Q9NX77 482 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 CNOT2Q9NZN8 540 aaKnown RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 DIMT1Q9UNQ2 313 aaKnown RBP12.54□□□□□ -0.4
VCX3A-201ENST00000381089 SMAD5-AS1Q9Y6J3 95 aa12.54□□□□□ -0.4
VCX3A-201ENST00000381089 IGHV3-72A0A0B4J1Y9 119 aa12.53□□□□□ -0.4
VCX3A-201ENST00000381089 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms