RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 SBF1O95248 1867 aa13.13□□□□□ -0.31
NPHP4-201ENST00000378156 ANKRD36A6QL64 1941 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 C7orf77A4D0Y5 90 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 CFDP00746 253 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 STUMQ69YW2 141 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 MRGPRDQ8TDS7 321 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 FGF11Q92914 225 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 WDR81Q562E7 1941 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 C3orf85A0A1B0GTC6 90 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 hADV38S2A0JD32 116 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 CDRT15L2A8MXV6 281 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 LMX1BO60663 402 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 FCGR3BO75015 233 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 OR5I1Q13606 314 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 VMA21Q3ZAQ7 101 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 SLC23A3Q6PIS1 610 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 UNQ9370/PRO34162Q6UXP9 181 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 PACRGQ96M98 296 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 GSX1Q9H4S2 264 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 KIAA1324LA8MWY0 1029 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 SNCGO76070 127 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 CD3EP07766 207 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 PKIAP61925 76 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 CBLN2Q8IUK8 224 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 ADAM20O43506 726 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 LPAR6P43657 344 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 GNG10P50151 68 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 ZNF362Q5T0B9 420 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 RNASEKQ6P5S7 137 aaKnown RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 INO80CQ6PI98 192 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-201ENST00000378156 OR10AD1Q8NGE0 317 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 TIMM9Q9Y5J7 89 aa13.12□□□□□ -0.31
NPHP4-201ENST00000378156 IGLV1-36A0A0B4J1U3 117 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 FAM24AA6NFZ4 105 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 MFNGO00587 321 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 PPIHO43447 177 aaKnown RBP13.11□□□□□ -0.31
NPHP4-201ENST00000378156 KCNAB3O43448 404 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 P2RY1P47900 373 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 SULT1A2P50226 295 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 IGLV3-21P80748 117 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-201ENST00000378156 Q5BKY6 102 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 RSRP1Q9BUV0 290 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 CHRNA10Q9GZZ6 450 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 OR6C3Q9NZP0 311 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-201ENST00000378156 A0A1W2PP11 408 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 NKX2-8O15522 239 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 RAB7AP51149 207 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 SMUG1Q53HV7 270 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 FAM209AQ5JX71 171 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-201ENST00000378156 OR5A2Q8NGI9 324 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 SPSB2Q99619 263 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 NPAS1Q99742 590 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 KCNK7Q9Y2U2 307 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 J3QT63 122 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 SOX15O60248 233 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 AGFG2O95081 481 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 CRYBA1P05813 215 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 AMTP48728 403 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 GNG4P50150 75 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 ROM1Q03395 351 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 OR10A7Q8NGE5 316 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
NPHP4-201ENST00000378156 ALX4Q9H161 411 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-201ENST00000378156 IGHV3-43A0A0B4J1X8 118 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 IGHV3-43DP0DP04 118 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 BCL2L2Q92843 193 aaPredicted RBP13.1□□□□□ -0.31
NPHP4-201ENST00000378156 GAL3ST2Q9H3Q3 398 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 MANBALQ9NQG1 85 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 CRISP2P16562 243 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 CDC34P49427 236 aaPredicted RBP13.1□□□□□ -0.31
NPHP4-201ENST00000378156 NHLH1Q02575 133 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 NHLH2Q02577 135 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 TGIF1Q15583 401 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 GPR27Q9NS67 375 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 IGLV3-19P01714 112 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 EGR4Q05215 589 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 DHRS7BQ6IAN0 325 aaPredicted RBP13.1□□□□□ -0.31
NPHP4-201ENST00000378156 Q6ZN92 141 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 OR2D2Q9H210 308 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 ARG1P05089 322 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 SULT1A1P50225 295 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 RHOBP62745 196 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 ZNF345Q14585 488 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 Q1RN00 199 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
NPHP4-201ENST00000378156 KHDC1LQ5JSQ8 128 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms