RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 ZNF154Q13106 437 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 P2RY6Q15077 328 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 UBTD1Q9HAC8 227 aa15.52■□□□□ 0.07
CNTNAP3-204ENST00000377656 A0A1W2PPC1 479 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 FCN1O00602 326 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 FTH1P19P0C7X4 201 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 AESQ08117 197 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 SLC23A3Q6PIS1 610 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 PNRC1Q12796 327 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 RASL11BQ9BPW5 248 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 TMEM208Q9BTX3 173 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 ABHD14AQ9BUJ0 271 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 COA4Q9NYJ1 87 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 SULT1A1P50225 295 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 RBM11P57052 281 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 RANP62826 216 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 FAM78BQ5VT40 261 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 GPX7Q96SL4 187 aaPredicted RBP15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 DDA1Q9BW61 102 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 NKX2-6A6NCS4 301 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 F5H697 171 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 IFI6P09912 130 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 FUT5Q11128 374 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 BSXQ3C1V8 233 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 SAP25Q8TEE9 199 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 TMUB1Q9BVT8 246 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 LIPGQ9Y5X9 500 aa15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 MRPS18BQ9Y676 258 aaKnown RBP15.51■□□□□ 0.07
CNTNAP3-204ENST00000377656 MIA3Q5JRA6 1907 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 DUXBA0A1W2PPF3 345 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 KIAA1324LA8MWY0 1029 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 SYNGR1O43759 233 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 MMP7P09237 267 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 RD3LP0DJH9 198 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 SFTPCP11686 197 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 IL11P20809 199 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 MANBALQ9NQG1 85 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 SPTBP11277 2137 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 EP300Q09472 2414 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 A0A1B0GU03 582 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 HOXD4P09016 255 aaPredicted RBP15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 HTR1DP28221 377 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 RPL31P62899 125 aaKnown RBP15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 DYRK2Q92630 601 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 CLEC5AQ9NY25 188 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 PTPRFP10586 1907 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 DNASE2BQ8WZ79 361 aa15.5■□□□□ 0.07
CNTNAP3-204ENST00000377656 RBBP6Q7Z6E9 1792 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 CDRT15L2A8MXV6 281 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 AMTP48728 403 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 RNASEKQ6P5S7 137 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 OR10A7Q8NGE5 316 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PRSS3P2Q8NHM4 247 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 SSMEM1Q8WWF3 244 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 NPTNQ9Y639 398 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 HS3ST3B1Q9Y662 390 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PPIAL4EA0A075B759 164 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PPIAL4DF5H284 164 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PPIAL4FP0DN26 164 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 ZNF788Q6ZQV5 615 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PPIAL4AQ9Y536 164 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 SIPA1L1O43166 1804 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 TCAPO15273 167 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 C1orf185Q5T7R7 199 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 C19orf35Q6ZS72 473 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 C9orf62Q8N4C0 152 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 ADAD2Q8NCV1 583 aaKnown RBP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 OR11H7Q8NGC8 314 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 HDHD3Q9BSH5 251 aaPredicted RBP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 A0A1W2PNV4 684 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 GCM2O75603 506 aaPredicted RBP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 EWSR1Q01844 656 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PPP1R3EQ9H7J1 279 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 PLXNB2O15031 1838 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
CNTNAP3-204ENST00000377656 EPOPA6NHQ4 379 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 NKX2-8O15522 239 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 FSTP19883 344 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 PSG5Q15238 335 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 ZNF488Q96MN9 340 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 NUDT16L1Q9BRJ7 211 aaKnown RBP15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 NAT8Q9UHE5 227 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 PILRBQ9UKJ0 227 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 WIPI2Q9Y4P8 454 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 IGHV3OR15-7A0A075B7D8 119 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 PRDX2P32119 198 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 G6PCP35575 357 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 CAMPP49913 170 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 ROM1Q03395 351 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 RPEL1Q2QD12 228 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 CEACAM21Q3KPI0 293 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 KRTCAP3Q53RY4 240 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 SCMH1Q96GD3 660 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 VAMP8Q9BV40 100 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 ALX4Q9H161 411 aaPredicted RBP15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 C11orf94C9JXX5 98 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 CCL8P80075 99 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 TOMM20LQ6UXN7 152 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 FAM219AQ8IW50 185 aa15.48■□□□□ 0.07
CNTNAP3-204ENST00000377656 RFLNBQ8N5W9 214 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms