RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 ZNF880Q6PDB4 577 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 IL1F10Q8WWZ1 152 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 COX4I2Q96KJ9 171 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 Q96MF0 132 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 MBNL3Q9NUK0 354 aaKnown RBP10.71□□□□□ -0.69
CBWD3-203ENST00000377344 ANAPC10Q9UM13 185 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 MGAT4AQ9UM21 535 aa10.71□□□□□ -0.69
CBWD3-203ENST00000377344 LOC105371242A0A075B767 164 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 POM121CA8CG34 1229 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 C12orf77C9JDV5 145 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 M0QYG6 137 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 FABP7O15540 132 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 SCTP09683 121 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 NAT1P18440 290 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 GZMHP20718 246 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 HRH1P35367 487 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TAS2R46P59540 309 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 HLA-DRB3P79483 266 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 FAAP20Q6NZ36 180 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 PRSS57Q6UWY2 283 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TMEM229BQ8NBD8 167 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 OR5AP2Q8NGF4 316 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 OR5H2Q8NGV7 314 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RFESDQ8TAC1 157 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 ARL11Q969Q4 196 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 NCOR1P1Q9H4R4 102 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 LPAR2Q9HBW0 351 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 MCUBQ9NWR8 336 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 LPAR3Q9UBY5 353 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 LINC00312Q9Y6C7 94 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 CSMD1Q96PZ7 3565 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TRBV23-1A0A0A0MS06 115 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 BET1O15155 118 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 SPINT2O43291 252 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RAB3DO95716 219 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 OMGP23515 440 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RFX2P48378 723 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 KLF9Q13886 244 aaPredicted RBP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 ZNF273Q14593 569 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 SRSF7Q16629 238 aaKnown RBP eCLIP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 LTC4SQ16873 150 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 IGSF11Q5DX21 431 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RNASE10Q5GAN6 216 aaKnown RBP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 CD276Q5ZPR3 534 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 Q6ZS49 121 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 KIRREL1Q96J84 757 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 TINAGL1Q9GZM7 467 aaPredicted RBP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 RPUSD1Q9UJJ7 312 aaKnown RBP10.7□□□□□ -0.7
CBWD3-203ENST00000377344 ITGB1BP2Q9UKP3 347 aa10.7□□□□□ -0.7
CBWD3-203ENST00000377344 ITPR2Q14571 2701 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 PPIAL4CA0A0B4J2A2 164 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 CENPXA8MT69 81 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 C22orf46C9J442 243 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 SDCBPO00560 298 aaPredicted RBP10.69□□□□□ -0.7
CBWD3-203ENST00000377344 HBZP02008 142 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 IFNA6P05013 189 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 CCL3L1P16619 93 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 FAUP35544 74 aaKnown RBP10.69□□□□□ -0.7
CBWD3-203ENST00000377344 HMGN3Q15651 99 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 ACTBL2Q562R1 376 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 TCF23Q7RTU1 214 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 OR4A4PQ8NGN8 299 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 OR1L1Q8NH94 360 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 GALMQ96C23 342 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 FOXC2Q99958 501 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 GAL3ST2Q9H3Q3 398 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 PALMDQ9NP74 551 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 NECAP2Q9NVZ3 263 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 CALYQ9NYX4 217 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 EHFQ9NZC4 300 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 ZNF107Q9UII5 783 aaPredicted RBP10.69□□□□□ -0.7
CBWD3-203ENST00000377344 UBE2J1Q9Y385 318 aaPredicted RBP10.69□□□□□ -0.7
CBWD3-203ENST00000377344 PDZD2O15018 2839 aa10.69□□□□□ -0.7
CBWD3-203ENST00000377344 KIAA2026Q5HYC2 2103 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 KBTBD11-OT1A0A1B0GTJ5 212 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 A0A1W2PPH5 198 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 FAM157AC9JC47 383 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 HSPA12AO43301 675 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 FOXH1O75593 365 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 DEFA1P59665 94 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 DEFA3P59666 94 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 TSPAN5P62079 268 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 CDK10Q15131 360 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 KRTAP1-3Q8IUG1 177 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 POC5Q8NA72 575 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 MAPK1IP1LQ8NDC0 245 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 OR4C16Q8NGL9 310 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 OR56B4Q8NH76 319 aa10.68□□□□□ -0.7
CBWD3-203ENST00000377344 CORO2AQ92828 525 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms