RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PTX4Q96A99 478 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 DHDHQ9UQ10 334 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 GJE1A6NN92 205 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 HLA-DOBP13765 273 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 RPL12P30050 165 aaKnown RBP13.44□□□□□ -0.26
FXN-201ENST00000377270 CCL20P78556 96 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 C5orf64Q2M2E5 130 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 TCF24Q7RTU0 167 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 VN1R17PQ8TDU5 208 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 TMEM230Q96A57 120 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 CLDN23Q96B33 292 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 TMEM106BQ9NUM4 274 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 TAS2R4Q9NYW5 299 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 PRR13Q9NZ81 148 aa13.44□□□□□ -0.26
FXN-201ENST00000377270 IGLV1-36A0A0B4J1U3 117 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 DCDC2BA2VCK2 349 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 RND3P61587 244 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 TLE3Q04726 772 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 SLC17A1Q14916 467 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 CST9LP1Q5W188 147 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 GUSBP11Q6P575 273 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 TMEM242Q9NWH2 141 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 LAMP3Q9UQV4 416 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 TNRC18O15417 2968 aaPredicted RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 TLX3O43711 291 aaPredicted RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 CRYGCP07315 174 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 FCGR2CP31995 323 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 ANKRD55Q3KP44 614 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 ABHD12BQ7Z5M8 362 aaPredicted RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 NFAM1Q8NET5 270 aaPredicted RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 PPP1R14AQ96A00 147 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 C5orf66Q9H5L9 145 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 UQCR10Q9UDW1 63 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 GPR132Q9UNW8 380 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 ODAMA1E959 279 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 GAGE12BA1L429 117 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 ZNF891A8MT65 544 aaPredicted RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 SCRG1O75711 98 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 MMP9P14780 707 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 EMP2P54851 167 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 TAS2R30P59541 319 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 DPPA3Q6W0C5 159 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 CHST4Q8NCG5 386 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 FAM213BQ8TBF2 198 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 VDAC3Q9Y277 283 aa13.43□□□□□ -0.26
FXN-201ENST00000377270 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
FXN-201ENST00000377270 CACNA1EQ15878 2313 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 IGLV3-12A0A075B6K2 115 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 MPZL1O95297 269 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 LIPFP07098 398 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 CHRM2P08172 466 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 IGFBP3P17936 291 aaPredicted RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 CEBPDP49716 269 aaPredicted RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 TMEM256Q8N2U0 113 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 OR2AJ1Q8NGZ0 328 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 ASB5Q8WWX0 329 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 P4HTMQ9NXG6 502 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 COA3Q9Y2R0 106 aaPredicted RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 G3V4G9 280 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 SEC11BP0C7V7 166 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 SCGB1A1P11684 91 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 ZNF708P17019 499 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 CDKN1AP38936 164 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 CCL7P80098 99 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 SPEM2Q0P670 501 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 DTWD2Q8NBA8 298 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 SARAFQ96BY9 339 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 C8orf44Q96CB5 159 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 ZNF703Q9H7S9 590 aaPredicted RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 FSCN3Q9NQT6 498 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 MRPS28Q9Y2Q9 187 aaKnown RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 STRAPQ9Y3F4 350 aaKnown RBP13.42□□□□□ -0.26
FXN-201ENST00000377270 SIT1Q9Y3P8 196 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 LIPGQ9Y5X9 500 aa13.42□□□□□ -0.26
FXN-201ENST00000377270 A0A1B0GUS0 222 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 A0A1W2PQM1 296 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 MEGF11A6BM72 1044 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 MS4A18H0YCH9 400 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 NUPR1O60356 82 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 IGHMP01871 453 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 CD55P08174 381 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 FSTP19883 344 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 SUPT4H1P63272 117 aaKnown RBP13.41□□□□□ -0.26
FXN-201ENST00000377270 MS4A18Q3C1V0 323 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
FXN-201ENST00000377270 Q6ZWC4 215 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 POM121L2Q96KW2 1035 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 ABHD6Q9BV23 337 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 SLC35D1Q9NTN3 355 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 WSB1Q9Y6I7 421 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 APOBEC1P41238 236 aaKnown RBP13.41□□□□□ -0.26
FXN-201ENST00000377270 PSG3Q16557 428 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 LYSMD4Q5XG99 296 aa13.41□□□□□ -0.26
FXN-201ENST00000377270 TMEM182Q6ZP80 229 aaPredicted RBP13.41□□□□□ -0.26
FXN-201ENST00000377270 MRPL21Q7Z2W9 205 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms