RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 EBI3Q14213 229 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 LTC4SQ16873 150 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 PIGYQ3MUY2 71 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 DDI2Q5TDH0 399 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 TRAT1Q6PIZ9 186 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 OR2W3Q7Z3T1 314 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 MRPL41Q8IXM3 137 aaKnown RBP11.69□□□□□ -0.54
HDAC6-204ENST00000376643 IZUMO1Q8IYV9 350 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 SUMF2Q8NBJ7 301 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 OR2T10Q8NGZ9 312 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 NEK7Q8TDX7 302 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 MRPS24Q96EL2 167 aaKnown RBP11.69□□□□□ -0.54
HDAC6-204ENST00000376643 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-204ENST00000376643 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
HDAC6-204ENST00000376643 CHCHD3Q9NX63 227 aaKnown RBP11.69□□□□□ -0.54
HDAC6-204ENST00000376643 TAS2R4Q9NYW5 299 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 SH2D7A6NKC9 451 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-204ENST00000376643 NCBP2LA6PVI3 153 aaKnown RBP11.68□□□□□ -0.54
HDAC6-204ENST00000376643 E9PI62 339 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 SSTR5P35346 364 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 CD69Q07108 199 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 RIPK1Q13546 671 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 CXorf66Q5JRM2 361 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-204ENST00000376643 RNF144BQ7Z419 303 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 MOB3BQ86TA1 216 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 ZNF695Q8IW36 515 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 STPG2Q8N412 459 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 ARL11Q969Q4 196 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 SMIM19Q96E16 107 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 AMBNQ9NP70 447 aa11.68□□□□□ -0.54
HDAC6-204ENST00000376643 EXOSC1Q9Y3B2 195 aaKnown RBP11.68□□□□□ -0.54
HDAC6-204ENST00000376643 SIRT4Q9Y6E7 314 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-204ENST00000376643 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 K7EIL1 84 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-204ENST00000376643 SPINT2O43291 252 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 RAMP3O60896 148 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 OR5H8P0DN80 308 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 SERPINA2P20848 420 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 CD1BP29016 333 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 HNF4GQ14541 408 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 PNLIPRP3Q17RR3 467 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 ATAD3CQ5T2N8 411 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 PLPPR1Q8TBJ4 325 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 THRSPQ92748 146 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
HDAC6-204ENST00000376643 MCRIP1C9JLW8 97 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 AIPO00170 330 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 CA11O75493 328 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 CDRT1O95170 752 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 MOSP00540 346 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 IGHV3-7P01780 117 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 LIMS3P0CW19 117 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 LIMS4P0CW20 117 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 YIF1BQ5BJH7 314 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 STEAP3Q658P3 488 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 PQLC1Q8N2U9 271 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 RASL11BQ9BPW5 248 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 CHCHD6Q9BRQ6 235 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 ABCG5Q9H222 651 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 C8orf4Q9NR00 106 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 GFOD1Q9NXC2 390 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
HDAC6-204ENST00000376643 SMPD3Q9NY59 655 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-204ENST00000376643 GEMIN2O14893 280 aaKnown RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 ELANEP08246 267 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 GPR12P47775 334 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 TAS2R43P59537 309 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 DGCR2P98153 550 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 FOXE3Q13461 319 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 CDH26Q8IXH8 852 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 SETD9Q8NE22 299 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 EAF1Q96JC9 268 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 NOL4LQ96MY1 436 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 B9D2Q9BPU9 175 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 S100A14Q9HCY8 104 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 AASSQ9UDR5 926 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 TRAPPC2LQ9UL33 140 aa11.65□□□□□ -0.54
HDAC6-204ENST00000376643 DIMT1Q9UNQ2 313 aaKnown RBP11.65□□□□□ -0.54
HDAC6-204ENST00000376643 FAM90A10PA6NDY2 464 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 FAM90A7PA6NKC0 464 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 FAM90A23PA8MXZ1 464 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 H0YHG0 523 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 C15orf65H3BRN8 121 aa11.64□□□□□ -0.55
HDAC6-204ENST00000376643 OGG1O15527 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms