RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	OR8B3	Q8NGG8	313 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	OR8B2	Q96RD0	313 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	TMEM106B	Q9NUM4	274 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	PRELID3B	Q9Y3B1	194 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568		A0A0A6YYJ9	748 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	IGHV3-21	A0A0B4J1V1	117 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	KANTR	A0A1W2PQU2	76 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	ZBTB25	P24278	435 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	RRAS2	P62070	204 aa	Predicted RBP	11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	SSX2	Q16385	188 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	CD200R1L	Q6Q8B3	271 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	IGFL2	Q6UWQ7	119 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	LILRB2	Q8N423	598 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	IGFBPL1	Q8WX77	278 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	MARS2	Q96GW9	593 aa	Known RBP	11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	PLA2G10	O15496	165 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	CRYZL1	O95825	349 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	IGHV1-46	P01743	117 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	OR4E1	P0C645	316 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	PPP1R1A	Q13522	171 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.47	□□□□□ -0.57
DDR1-225	ENST00000376568		Q8IYB0	196 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	SPAG16	Q8N0X2	631 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	GFI1	Q99684	422 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	TMEM246	Q9BRR3	403 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	KALRN	O60229	2985 aa		11.47	□□□□□ -0.57
DDR1-225	ENST00000376568	PLXNB1	O43157	2135 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	hADV38S2	A0JD32	116 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	SPANXN5	Q5MJ07	72 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	NHLRC1	Q6VVB1	395 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	GAPT	Q8N292	157 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	RAB39B	Q96DA2	213 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	S1PR3	Q99500	378 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568		A0A0B4J2A0	478 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	NAP1L6	A6NFF2	107 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	ZNF14	P17017	642 aa	Predicted RBP	11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	TMEM50B	P56557	158 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	CDSN	Q15517	529 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	LY6E	Q16553	131 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	KCNMB1	Q16558	191 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	HIST3H3	Q16695	136 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	ADAD2	Q8NCV1	583 aa	Known RBP	11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	OR13C8	Q8NGS7	320 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	UPRT	Q96BW1	309 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	SHPK	Q9UHJ6	478 aa		11.46	□□□□□ -0.57
DDR1-225	ENST00000376568	DSCAM	O60469	2012 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568		A0A0G2JK05	382 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	SNRPC	P09234	159 aa	Known RBP	11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	FGF12	P61328	243 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	ADIPOQ	Q15848	244 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	ZNF525	Q8N782	197 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	HSD17B11	Q8NBQ5	300 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	OR5AP2	Q8NGF4	316 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	OR4A16	Q8NH70	328 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568	MFF	Q9GZY8	342 aa		11.46	□□□□□ -0.58
DDR1-225	ENST00000376568		A0A1B0GW55	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	C1QL1	O75973	258 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	TGFA	P01135	160 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L2	P0CJ85	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L3	P0CJ86	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L4	P0CJ87	422 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L5	P0CJ88	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L6	P0CJ89	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L7	P0CJ90	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DEFA4	P12838	97 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	COL8A2	P25067	703 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	UNQ9370/PRO34162	Q6UXP9	181 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	DUX4	Q9UBX2	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	RGS11	O94810	467 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	HBZ	P02008	142 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	OR5AC1	P0C628	307 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	ZNF616	Q08AN1	781 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	H2BFWT	Q7Z2G1	175 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	VKORC1L1	Q8N0U8	176 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	ZNF485	Q8NCK3	441 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	NBEA	Q8NFP9	2946 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	FLNC	Q14315	2725 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	ANKRD17	O75179	2603 aa	Known RBP	11.45	□□□□□ -0.58
DDR1-225	ENST00000376568		B9A039	149 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	MLNR	O43193	412 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	CST7	O76096	145 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	PSG2	P11465	335 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	KCNJ8	Q15842	424 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	ZNF787	Q6DD87	383 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	ZNF546	Q86UE3	836 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	CDH24	Q86UP0	819 aa		11.45	□□□□□ -0.58
DDR1-225	ENST00000376568	TRIM64	A6NGJ6	449 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	GPR37	O15354	613 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	F2RL1	P55085	397 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	DLX5	P56178	289 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	RPUSD3	Q6P087	351 aa	Known RBP	11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	LIME1	Q9H400	295 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	PLEKHF2	Q9H8W4	249 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	ETV2	O00321	342 aa	Predicted RBP	11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	ETV6	P41212	452 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	ARHGDIB	P52566	201 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	MRPS11	P82912	194 aa	Known RBP	11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	SPRN	Q5BIV9	151 aa		11.44	□□□□□ -0.58
DDR1-225	ENST00000376568	IGHV3-48	P01763	117 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms