RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 IGHV1-45A0A0A0MS14 117 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 GYPAP02724 150 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 MDH2P40926 338 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 MMP16P51512 607 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF83P51522 516 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 VAMP8Q9BV40 100 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RTN4RQ9BZR6 473 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RALGAPA1Q6GYQ0 2036 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 H0YL77 283 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CD8AP01732 235 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 SELENOHQ8IZQ5 122 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF501Q96CX3 271 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CIB3Q96Q77 187 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RTBDNQ9BSG5 229 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 KLF13Q9Y2Y9 288 aaPredicted RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF106Q9H2Y7 1883 aaKnown RBP5.69□□□□□ -1.5
SMC1A-202ENST00000375340 PATE3B3GLJ2 98 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 RAMP1O60894 148 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 APOA2P02652 100 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 WFDC8Q8IUA0 241 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CRIPAKQ8N1N5 446 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM9BQ9NQ34 198 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 SSUH2Q9Y2M2 353 aa5.69□□□□□ -1.5
SMC1A-202ENST00000375340 CLDN34H7C241 214 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TRAF3IP2O43734 574 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 CDC34P49427 236 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 IL11RAQ14626 422 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 UBE2V2Q15819 145 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 WDR25Q64LD2 544 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SLC25A47Q6Q0C1 308 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SSMEM1Q8WWF3 244 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TIAF1O95411 115 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 PPP1CCP36873 323 aaKnown RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 GNG4P50150 75 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 C1orf100Q5SVJ3 147 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 LRRC29Q8WV35 223 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 HIF1ANQ9NWT6 349 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ELOA3CA0A087WX78 387 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TRGC2P03986 189 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TCL1AP56279 114 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 AARDQ4LEZ3 155 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ASPHD2Q6ICH7 369 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 MAFAQ8NHW3 353 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 OIT3Q8WWZ8 545 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF355PQ9NSJ1 428 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ARHGEF17Q96PE2 2063 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1W2PPE3 182 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 DHRS7CA6NNS2 312 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 PSG4Q00888 419 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 CXorf66Q5JRM2 361 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 COL13A1Q5TAT6 717 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SLC23A3Q6PIS1 610 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 DHRS11Q6UWP2 260 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 AQP10Q96PS8 301 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 OR5H1A6NKK0 313 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 HES1Q14469 280 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 IZUMO4Q1ZYL8 232 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 LY6G6FQ5SQ64 297 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 KDF1Q8NAX2 398 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 OR1A1Q9P1Q5 309 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 RNF222A6NCQ9 220 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 C3orf80F5H4A9 247 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SYNGR1O43759 233 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF343Q6P1L6 599 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM147Q9BVK8 224 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 PRSS50Q9UI38 385 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 NPTNQ9Y639 398 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ATP23Q9Y6H3 246 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 PAGE4O60829 102 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 IGLV3-21P80748 117 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 AESQ08117 197 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM187Q14656 261 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 CDCP2Q5VXM1 449 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF818PQ6ZRF7 136 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SMRP1Q8NCR6 262 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 HEXA-AS1Q9H8Q6 139 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 GVINP1Q7Z2Y8 2422 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SEC14L6B5MCN3 397 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TGOLN2O43493 480 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 CNIH1O95406 144 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SRD5A2P31213 254 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 IQCJQ1A5X6 159 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 TEX30Q5JUR7 227 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 DHRS7BQ6IAN0 325 aaPredicted RBP5.68□□□□□ -1.5
SMC1A-202ENST00000375340 ACSM6Q6P461 480 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 HIST1H2BAQ96A08 127 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 SLC2A8Q9NY64 477 aa5.68□□□□□ -1.5
SMC1A-202ENST00000375340 A0A0A6YYD4 124 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 LRRC30A6NM36 301 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 SYNGR2O43760 224 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 HEXAP06865 529 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MPLP40238 635 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 OR52L2PQ8NGH6 319 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MISP3Q96FF7 219 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MS4A10Q96PG2 267 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms