RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PIGPP57054 158 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 RNF151Q2KHN1 245 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 SP6Q3SY56 376 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ABCA11PQ4W5N1 156 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 LYZL2Q7Z4W2 148 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 LGI3Q8N145 548 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 OR51G1Q8NGK1 321 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ORAOV1Q8WV07 137 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 CHTOPQ9Y3Y2 248 aaKnown RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 TRAV1-1A0A0B4J248 108 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 A0A1W2PNU3 283 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 BLACEA4D250 179 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 MAP1LC3B2A6NCE7 125 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 H3BML4 177 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF823P16415 610 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF20P17024 532 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 GNB2P62879 340 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 IL11RAQ14626 422 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 TMEM187Q14656 261 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 TRIP6Q15654 476 aaKnown RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 PLA2G2CQ5R387 149 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 RTL6Q6ICC9 239 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 LRP11Q86VZ4 500 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 SLC24A4Q8NFF2 622 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 OR52M1Q8NGK5 317 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 HOXB13Q92826 284 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 IMMP2LQ96T52 175 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 P2RX4Q99571 388 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 PCGF1Q9BSM1 259 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 STRADBQ9C0K7 418 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 MAP1LC3BQ9GZQ8 125 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 OR10A2Q9H208 303 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 NAA60Q9H7X0 242 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 IGLV1-36A0A0B4J1U3 117 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 TSPAN2O60636 221 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 IL33O95760 270 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 MT-CO3P00414 261 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ACP1P24666 158 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 H1FOOQ8IZA3 346 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 CISD2Q8N5K1 135 aaKnown RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 REEP6Q96HR9 211 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 VAMP8Q9BV40 100 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 METTL7AQ9H8H3 244 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 PLEKHF2Q9H8W4 249 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF701Q9NV72 531 aaPredicted RBP10.51□□□□□ -0.73
C9orf3-203ENST00000375315 NAT8Q9UHE5 227 aa10.51□□□□□ -0.73
C9orf3-203ENST00000375315 FRG2CA6NGY1 282 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 CCL25O15444 150 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 TNFSF15O95150 251 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 OMGP23515 440 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
C9orf3-203ENST00000375315 SPACA5Q96QH8 159 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 RBKSQ9H477 322 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 TNRC6BQ9UPQ9 1833 aaKnown RBP10.5□□□□□ -0.73
C9orf3-203ENST00000375315 HRASP01112 189 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 HPNP05981 417 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 CTLA4P16410 223 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 GZMHP20718 246 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 FOLR3P41439 243 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 RPL27P61353 136 aaKnown RBP10.5□□□□□ -0.73
C9orf3-203ENST00000375315 ZNF92Q03936 586 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 EGR4Q05215 589 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 SUMF1Q8NBK3 374 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 OR51T1Q8NGJ9 327 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 CENPMQ9NSP4 180 aa10.5□□□□□ -0.73
C9orf3-203ENST00000375315 MPV17LQ2QL34 196 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ATP1A1-AS1Q5TC04 95 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 RTN4IP1Q8WWV3 396 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ALKBH7Q9BT30 221 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 OR6C3Q9NZP0 311 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 PRSS50Q9UI38 385 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 PAM16Q9Y3D7 125 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 TPRP12270 2363 aaKnown RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 LOC101059948A0A1B0GTJ6 334 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 IGSF23A1L1A6 192 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 IFNL4K9M1U5 179 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 RRP8O43159 456 aaKnown RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 KLF7O75840 302 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 MTCP1P56278 107 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 KLHL24Q6TFL4 600 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 OR5C1Q8NGR4 320 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 CT55Q8WUE5 264 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 IL22RA2Q969J5 263 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 MOB3AQ96BX8 217 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 CIB3Q96Q77 187 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ALKBH3Q96Q83 286 aaPredicted RBP10.49□□□□□ -0.73
C9orf3-203ENST00000375315 GPER1Q99527 375 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 PIEZO2Q9H5I5 2752 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 SERPINE3A8MV23 424 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 C9orf172C9J069 976 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 AQP7O14520 342 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 CIDEAO60543 219 aa10.49□□□□□ -0.73
C9orf3-203ENST00000375315 ZFAND5O76080 213 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms