RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 X6R8D5 127 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 SNX3O60493 162 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 TOMM40O96008 361 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 SOD1P00441 154 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 ARSBP15848 533 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 HCCSP53701 268 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 GUCA2BQ16661 112 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 OR8D4Q8NGM9 314 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 TFB1MQ8WVM0 346 aaKnown RBP7.69□□□□□ -1.18
UBR4-201ENST00000375218 CSF3RQ99062 836 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 SULT4A1Q9BR01 284 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
UBR4-201ENST00000375218 A0A0G2JND7 137 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ZNF816-ZNF321PA0A0X1KG74 233 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 OR5G3P0C626 314 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 HOXB9P17482 250 aaPredicted RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 SELENOWP63302 87 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 EFEMP1Q12805 493 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 MESTQ5EB52 335 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ZFP41Q8N8Y5 198 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 KLK6Q92876 244 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GALNT14Q96FL9 552 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ADGRG7Q96K78 797 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GFI1Q99684 422 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 FOXC2Q99958 501 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 NTNG1Q9Y2I2 539 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 INSL5Q9Y5Q6 135 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 CEACAM18A8MTB9 384 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 E7ENX8 843 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 CLDN11O75508 207 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 PIRTP0C851 137 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ATXN7L3Q14CW9 347 aaPredicted RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 AGTRAPQ6RW13 159 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 KIR3DL3Q8N743 410 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 MFSD8Q8NHS3 518 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 RNF128Q8TEB7 428 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 AJUBAQ96IF1 538 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 HSPB9Q9BQS6 159 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 PRRC2CQ9Y520 2896 aaKnown RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 ZNF292O60281 2723 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 TCRBV5S2A0A599 114 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 UBE2QL1A1L167 161 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE12JA6NER3 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE7O76087 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE12FP0CL80 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE12GP0CL81 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE12IP0CL82 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 HOXB4P17483 251 aaPredicted RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 HOXA5P20719 270 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 SLC18A1P54219 525 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 GAGE4Q13068 117 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ZCCHC23Q6ZST2 131 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 GPR135Q8IZ08 494 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 TMEM52Q8NDY8 209 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 TSACCQ96A04 125 aaPredicted RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 THBS3P49746 956 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 BCL2L15Q5TBC7 163 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 OTPQ5XKR4 325 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 TMEM159Q96B96 161 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 NRIP2Q9BQI9 281 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 REG4Q9BYZ8 158 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 ELL3Q9HB65 397 aaPredicted RBP7.68□□□□□ -1.18
UBR4-201ENST00000375218 UQCC1Q9NVA1 299 aa7.68□□□□□ -1.18
UBR4-201ENST00000375218 TMEM202A6NGA9 273 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 SOX14O95416 240 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF140P52738 457 aaPredicted RBP7.67□□□□□ -1.18
UBR4-201ENST00000375218 SHHQ15465 462 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF385BQ569K4 471 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 TMEM86BQ8N661 226 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 OR51A4Q8NGJ6 313 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ADOQ96SZ5 270 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 GABRPO00591 440 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 OPN1SWP03999 348 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 CISD3P0C7P0 127 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 HLA-EP13747 358 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 SRD5A1P18405 259 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 GZMMP51124 257 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 SSR4P51571 173 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 NDUFA6P56556 154 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 EIF3IQ13347 325 aaKnown RBP7.67□□□□□ -1.18
UBR4-201ENST00000375218 OR51A2Q8NGJ7 313 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF431Q8TF32 576 aaPredicted RBP7.67□□□□□ -1.18
UBR4-201ENST00000375218 XAGE5Q8WWM1 108 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 C19orf24Q9BVV8 132 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF442Q9H7R0 627 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 OR51B2Q9Y5P1 312 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 TRAF3IP2O43734 574 aaPredicted RBP7.67□□□□□ -1.18
UBR4-201ENST00000375218 OR1I1O60431 355 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 UPK1BO75841 260 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 GGT1P19440 569 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 RPS25P62851 125 aaKnown RBP7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF154Q13106 437 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 ZNF181Q2M3W8 571 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 SYTL3Q4VX76 610 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 SAMD5Q5TGI4 173 aa7.67□□□□□ -1.18
UBR4-201ENST00000375218 OR4C11Q6IEV9 310 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms