RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 B4GALT1P15291 398 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 CRYGSP22914 178 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 NPBWR2P48146 333 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 TAS2R30P59541 319 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 RAB35Q15286 201 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM211Q6ICI0 200 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF880Q6PDB4 577 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 SLC25A26Q70HW3 274 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 OR1F12Q8NHA8 337 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 NEK7Q8TDX7 302 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM56Q96MV1 263 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 ATP5SQ99766 215 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 ZNF665Q9H7R5 613 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.88
CCDC40-203ENST00000374877 CACNA1HO95180 2353 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 A0A087WZY1 265 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 IFNA5P01569 189 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 BAXQ07812 192 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 TMEM267Q0VDI3 215 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FAM27BQ5VT28 67 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 REC114Q7Z4M0 266 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 STX12Q86Y82 276 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 CALHM1Q8IU99 346 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FADS6Q8N9I5 356 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 M1APQ8TC57 530 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 EXTL1Q92935 676 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 C9orf172C9J069 976 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 RPL36A-HNRNPH2H7BZ11 118 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 TP53I11O14683 189 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 TNFSF11O14788 317 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 KLF7O75840 302 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 SCTP09683 121 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FTH1P19P0C7X4 201 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FOSL1P15407 271 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF32P17041 273 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 FOXL2NBQ6ZUU3 175 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF611Q8N823 705 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 ALKBH3Q96Q83 286 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 SSX3Q99909 188 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 RSG1Q9BU20 258 aa9.52□□□□□ -0.89
CCDC40-203ENST00000374877 AKIRIN1Q9H9L7 192 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 CHCHD2Q9Y6H1 151 aaPredicted RBP9.52□□□□□ -0.89
CCDC40-203ENST00000374877 IGKV1D-13A0A0B4J2D9 117 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 A0A1W2PNU3 283 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 B4DEV8 164 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 PHOX2AO14813 284 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 SYNGR3O43761 229 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 UMODP07911 640 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 CELA2AP08217 269 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 VDAC1P21796 283 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 FKBP2P26885 142 aaKnown RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 MRPS34P82930 218 aaKnown RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF92Q03936 586 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 OR8B8Q15620 311 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 EXT1Q16394 746 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 FAM90A2PQ658T7 463 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 ASCL4Q6XD76 172 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 RNASE11Q8TAA1 199 aaKnown RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 SIGLEC12Q96PQ1 595 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 CCL28Q9NRJ3 127 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 TCFL5Q9UL49 500 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 PTRH2Q9Y3E5 179 aaKnown RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 VAMP5O95183 116 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 FOLR3P41439 243 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 FUT6P51993 359 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 ID3Q02535 119 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 DKKL1Q9UK85 242 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 CYB5R3P00387 301 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-203ENST00000374877 IL24Q13007 206 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 PCOLCEQ15113 449 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 ZIC4Q8N9L1 334 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 RPRMQ9NS64 109 aa9.51□□□□□ -0.89
CCDC40-203ENST00000374877 BCL2P10415 239 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 NDUFB7P17568 137 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 TUBG1P23258 451 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 IL2RGP31785 369 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 IZUMO4Q1ZYL8 232 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 Q3ZCU0 254 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 DMRTC2Q8IXT2 367 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-203ENST00000374877 OTOGLQ3ZCN5 2332 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 A0A1B0GU03 582 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 SLC22A20A6NK97 555 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 DFFBO76075 338 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 CEACAM1P13688 526 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 MMP9P14780 707 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 CD82P27701 267 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 TLE1Q04724 770 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 USF2Q15853 346 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-203ENST00000374877 SP5Q6BEB4 398 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-203ENST00000374877 TIPARPQ7Z3E1 657 aaKnown RBP9.5□□□□□ -0.89
CCDC40-203ENST00000374877 SCGB1C1Q8TD33 95 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 CT55Q8WUE5 264 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF407Q9C0G0 2248 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms