RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 UBE2J1Q9Y385 318 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 DOCK11Q5JSL3 2073 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ABCA7Q8IZY2 2146 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ADAMTS9Q9P2N4 1935 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 RALGAPA1Q6GYQ0 2036 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV3D-11A0A0A0MRZ8 115 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 C3orf85A0A1B0GTC6 90 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 GRIFINA4D1Z8 144 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 LRRC3CA6NJW4 275 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 TRAF3IP2O43734 574 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 CA11O75493 328 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 OR7C1O76099 320 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SCGB1D1O95968 90 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IFNA10P01566 189 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1D-33P01593 117 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IGKV1-33P01594 117 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 IGHMP01871 453 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 CEACAM1P13688 526 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 GABRG2P18507 467 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 GNRHRP30968 328 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 PAX9P55771 341 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 DAZAP2Q15038 168 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 EXT1Q16394 746 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SPINK9Q5DT21 86 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 C9orf135Q5VTT2 229 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 CST9LP1Q5W188 147 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF705AQ6ZN79 300 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 Q6ZRM9 215 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 MRPL41Q8IXM3 137 aaKnown RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 C1orf87Q8N0U7 546 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 GAPTQ8N292 157 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 NOXO1Q8NFA2 376 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 FGFBP3Q8TAT2 258 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 Q96M66 194 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SCGB3A2Q96PL1 93 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 DIRC2Q96SL1 478 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 SF3B5Q9BWJ5 86 aaKnown RBP4.66□□□□□ -1.66
ATG4A-204ENST00000372246 BCO1Q9HAY6 547 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ASCL3Q9NQ33 180 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 CCL28Q9NRJ3 127 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 PLEK2Q9NYT0 353 aa4.66□□□□□ -1.66
ATG4A-204ENST00000372246 ATMQ13315 3056 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 EML6Q6ZMW3 1958 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 EPOPA6NHQ4 379 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 VSTM5A8MXK1 200 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ITGB1BP1O14713 200 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 MPPED1O15442 326 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 TRAPPC6AO75865 159 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 TIAF1O95411 115 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 NTF4P34130 210 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 CHRNA7P36544 502 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 VAMP2P63027 116 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 PAX5Q02548 391 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 CFHR1Q03591 330 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 JOSD1Q15040 202 aaPredicted RBP4.65□□□□□ -1.66
ATG4A-204ENST00000372246 DNM1P34Q6PK57 102 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ERASQ7Z444 233 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF695Q8IW36 515 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 FAM185AQ8N0U4 392 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 OR1P1Q8NH06 330 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 IL22RA2Q969J5 263 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 SDSLQ96GA7 329 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF488Q96MN9 340 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 CDCA3Q99618 268 aaPredicted RBP4.65□□□□□ -1.66
ATG4A-204ENST00000372246 NDUFAF3Q9BU61 184 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 PLK3Q9H4B4 646 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF442Q9H7R0 627 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 NECAP2Q9NVZ3 263 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 KIAA1456Q9P272 454 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 COPS7AQ9UBW8 275 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 ST3GAL6Q9Y274 331 aa4.65□□□□□ -1.66
ATG4A-204ENST00000372246 STRAPQ9Y3F4 350 aaKnown RBP4.65□□□□□ -1.66
ATG4A-204ENST00000372246 DOCK7Q96N67 2140 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 SPTY2D1-AS1A0A0U1RR47 76 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF816-ZNF321PA0A0X1KG74 233 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1B0GU03 582 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 LOC102723971A0A1B0GUV8 181 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 VSTM2BA6NLU5 285 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 SERPINE3A8MV23 424 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 F2Z2F3 143 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 CLDN34H7C241 214 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 SCGNO76038 276 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 PPYP01298 95 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 CRYAAP02489 173 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 CEACAM6P40199 344 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 CAPZBP47756 277 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 IDH3GP51553 393 aaPredicted RBP4.65□□□□□ -1.67
ATG4A-204ENST00000372246 SOX8P57073 446 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 H3F3AP84243 136 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 PMP22Q01453 160 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 HERPUD1Q15011 391 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF506Q5JVG8 444 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF774Q6NX45 483 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 DOK3Q7L591 496 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 IL22RA1Q8N6P7 574 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 OR51G1Q8NGK1 321 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 M1APQ8TC57 530 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 OR5P3Q8WZ94 311 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 SIGLEC12Q96PQ1 595 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 C11orf1Q9H5F2 150 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms