RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 C17orf98A8MV24 154 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 RGS5O15539 181 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 SCGNO76038 276 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 NAPSAO96009 420 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 CGB3P0DN86 165 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 CGB7P0DN87 165 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 MADCAM1Q13477 382 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 C17orf58Q2M2W7 97 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 PPP1R14BQ96C90 147 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 CMSS1Q9BQ75 279 aaKnown RBP13.38□□□□□ -0.27
TMEM53-203ENST00000372242 OCEL1Q9H607 264 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
TMEM53-203ENST00000372242 TRAV40A0A0B4J280 105 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 APOA1P02647 267 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 PTHLHP12272 177 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 GDNFP39905 211 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 KLRD1Q13241 179 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 ZNF260Q3ZCT1 412 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 KLF17Q5JT82 389 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-203ENST00000372242 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 BAIAP2L2Q6UXY1 529 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 LAX1Q8IWV1 398 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 SETD6Q8TBK2 473 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 LHX4Q969G2 390 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 C6orf62Q9GZU0 229 aaPredicted RBP13.37□□□□□ -0.27
TMEM53-203ENST00000372242 MIXL1Q9H2W2 232 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 GAL3ST2Q9H3Q3 398 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 TMEM160Q9NX00 188 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 CALYQ9NYX4 217 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 MXRA5Q9NR99 2828 aa13.37□□□□□ -0.27
TMEM53-203ENST00000372242 KBTBD11-OT1A0A1B0GTJ5 212 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 hCG_1809904A0A1W2PP81 198 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PPE2 198 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PR64 198 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PRV1 198 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 ZNF729A6NN14 1252 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-203ENST00000372242 SERPINE3A8MV23 424 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 CLPXO76031 633 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 CD3GP09693 182 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 IGHV1-8P0DP01 117 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 PRTN3P24158 256 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 ARFRP1Q13795 201 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 PRR18Q8N4B5 295 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 MCFD2Q8NI22 146 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 TNFRSF14Q92956 283 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 BEX2Q9BXY8 128 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 A0A0A6YYH2 397 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 FAM172BPA6NC97 362 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 A6NJ64 397 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 C12orf77C9JDV5 145 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 XRCC3O43542 346 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 HOXB4P17483 251 aaPredicted RBP13.36□□□□□ -0.27
TMEM53-203ENST00000372242 GZMHP20718 246 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 MRPS15P82914 257 aaKnown RBP13.36□□□□□ -0.27
TMEM53-203ENST00000372242 LTC4SQ16873 150 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 TMEM69Q5SWH9 247 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 HACD4Q5VWC8 232 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 NANPQ8TBE9 248 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 NUDCD2Q8WVJ2 157 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 ARL11Q969Q4 196 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
TMEM53-203ENST00000372242 MBNL3Q9NUK0 354 aaKnown RBP13.36□□□□□ -0.27
TMEM53-203ENST00000372242 FN1P02751 2386 aaKnown RBP13.36□□□□□ -0.27
TMEM53-203ENST00000372242 CENPVL3A0A0U1RRI6 287 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PRD5 423 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PRF3 423 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 A0A1W2PRM7 423 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 RNASEK-C17orf49H0YIS7 233 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 C15orf65H3BRN8 121 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 RBP4P02753 201 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 GSTP1P09211 210 aaKnown RBP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 HNF1AP20823 631 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 SRP14P37108 136 aaKnown RBP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 UTF1Q5T230 341 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 HEPN1Q6WQI6 88 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 UNKLQ9H9P5 680 aaKnown RBP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 TAF9BQ9HBM6 251 aa13.35□□□□□ -0.27
TMEM53-203ENST00000372242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 ZNF230Q9UIE0 474 aaPredicted RBP13.35□□□□□ -0.27
TMEM53-203ENST00000372242 FSHBP01225 129 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 COX7A1P24310 79 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 NFYBP25208 207 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 ARL6IP1Q15041 203 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 PNKDQ8N490 385 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 OR1L1Q8NH94 360 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 MAFIPQ8WZ33 124 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 KIRREL1Q96J84 757 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 NXF2Q9GZY0 626 aaKnown RBP13.34□□□□□ -0.27
TMEM53-203ENST00000372242 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
TMEM53-203ENST00000372242 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms