RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 MRGPRDQ8TDS7 321 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 CMSS1Q9BQ75 279 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 MGAT4AQ9UM21 535 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 KCNK7Q9Y2U2 307 aa12.74□□□□□ -0.37
PRPF38B-202ENST00000370022 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 XRCC3O43542 346 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 IGHV1-8P0DP01 117 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 GNB3P16520 340 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 SRP14P37108 136 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CDNFQ49AH0 187 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 GPR157Q5UAW9 335 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 HEXA-AS1Q9H8Q6 139 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CHMP1AQ9HD42 196 aaPredicted RBP12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 SIRT7Q9NRC8 400 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CALYQ9NYX4 217 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 KCNIP1Q9NZI2 227 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 A0A075B6Q4 140 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 NPIPB11E5RHQ5 1161 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CRLF1O75462 422 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 CD3GP09693 182 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 PITPNAQ00169 270 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 C17orf58Q2M2W7 97 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 HACD4Q5VWC8 232 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 SESN1Q9Y6P5 492 aa12.73□□□□□ -0.37
PRPF38B-202ENST00000370022 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 SPINT2O43291 252 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 SRD5A1P18405 259 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 CDK2P24941 298 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 ARFRP1Q13795 201 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 RTN4RL2Q86UN3 420 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 LHX4Q969G2 390 aa12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 SLIRPQ9GZT3 109 aaKnown RBP12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 ZMAT3Q9HA38 289 aaKnown RBP12.72□□□□□ -0.37
PRPF38B-202ENST00000370022 DSCAML1Q8TD84 2053 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 TRAV18A0A075B6X5 111 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 RNASEK-C17orf49H0YIS7 233 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 C15orf65H3BRN8 121 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 HPGDSO60760 199 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 EIF4EP06730 217 aaKnown RBP12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 HOXB4P17483 251 aaPredicted RBP12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 RCC1P18754 421 aaPredicted RBP12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 SSTR5P35346 364 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 TALDO1P37837 337 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 MNDAP41218 407 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 UBE2E1P51965 193 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 TMEM69Q5SWH9 247 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 OLFML2AQ68BL7 652 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 IL17RELQ6ZVW7 336 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 ARL11Q969Q4 196 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 TMEM133Q9H2Q1 129 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 IDI2-AS1Q9NZ38 188 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 ADAM30Q9UKF2 790 aa12.71□□□□□ -0.37
PRPF38B-202ENST00000370022 TLN2Q9Y4G6 2542 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 A0A087X0M5 115 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 IGHV1-69DA0A0B4J2H0 117 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 A0A1B0GX30 115 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 C12orf77C9JDV5 145 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 RGS5O15539 181 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 IGHV1-69P01742 117 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 MELTFP08582 738 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 ELK1P19419 428 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 FPR2P25090 351 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 SRSF7Q16629 238 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 OR52M1Q8NGK5 317 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 MCFD2Q8NI22 146 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 C17orf50Q8WW18 174 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 KIRREL1Q96J84 757 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 HDHD3Q9BSH5 251 aaPredicted RBP12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 DCUN1D5Q9BTE7 237 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 NXF2Q9GZY0 626 aaKnown RBP12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 TAF9BQ9HBM6 251 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 Q9N2K0 584 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 A3GALT2U3KPV4 340 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 WNK2Q9Y3S1 2297 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 MTORP42345 2549 aa12.7□□□□□ -0.38
PRPF38B-202ENST00000370022 TMEM235A6NFC5 223 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms