RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C20orf85Q9H1P6 137 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 OR51I2Q9H344 312 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ELF5Q9UKW6 265 aaPredicted RBP7.37□□□□□ -1.23
TPM3-213ENST00000368545 PLEKHA6Q9Y2H5 1048 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 KCNK7Q9Y2U2 307 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 A0A1B0GWJ7 208 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 PDCD6O75340 191 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 RAB3DO95716 219 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 CD3DP04234 171 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 ZNF250P15622 560 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 PMELP40967 661 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 MRPS15P82914 257 aaKnown RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 MPV17LQ2QL34 196 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 FBXL19-AS1Q494R0 122 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 TMEM255AQ5JRV8 349 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 HAGHLQ6PII5 290 aaPredicted RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 ZNF782Q6ZMW2 699 aaPredicted RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 RBPMS2Q6ZRY4 209 aaKnown RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 FBXL14Q8N1E6 418 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 NUP37Q8NFH4 326 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 FAM222BQ8WU58 562 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 SLAMF9Q96A28 289 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 NGBQ9NPG2 151 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 RP1L1Q8IWN7 2480 aaPredicted RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 NBPF19A0A087WUL8 3843 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 GEMIN2O14893 280 aaKnown RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 SSX5O60225 188 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 NDUFB6O95139 128 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 ADH4P08319 380 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 BCL3P20749 454 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 HLA-DMAP28067 261 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 CHATP28329 748 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 SELENOVP59797 346 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 TAF9Q16594 264 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 PIGYQ3MUY2 71 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 RNASE10Q5GAN6 216 aaKnown RBP7.36□□□□□ -1.23
TPM3-213ENST00000368545 OR13G1Q8NGZ3 307 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 PRRT1Q99946 306 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 NEURL2Q9BR09 285 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 SLC2A8Q9NY64 477 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 MTCH1Q9NZJ7 389 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 SCP2D1Q9UJQ7 156 aa7.36□□□□□ -1.23
TPM3-213ENST00000368545 PRR14LQ5THK1 2151 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 MTORP42345 2549 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 TRAV6A0A075B6T7 132 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 DISC1C4P0D8 188 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 NPIPB11E5RHQ5 1161 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 PRAF2O60831 178 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 IGHV3-13P01766 116 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 SNRNP70P08621 437 aaKnown RBP7.35□□□□□ -1.23
TPM3-213ENST00000368545 ACAA1P09110 424 aaPredicted RBP7.35□□□□□ -1.23
TPM3-213ENST00000368545 FUT3P21217 361 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 DTYMKP23919 212 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 NPBWR2P48146 333 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 FABP6P51161 128 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 KLF3P57682 345 aaPredicted RBP7.35□□□□□ -1.23
TPM3-213ENST00000368545 ZNF154Q13106 437 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 FBLN7Q53RD9 439 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 SIGIRRQ6IA17 410 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 FAAP20Q6NZ36 180 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 C6orf201Q7Z4U5 140 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 AKAP14Q86UN6 197 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 OR10AD1Q8NGE0 317 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 EMG1Q92979 244 aaKnown RBP7.35□□□□□ -1.23
TPM3-213ENST00000368545 SLC25A21Q9BQT8 299 aaPredicted RBP7.35□□□□□ -1.23
TPM3-213ENST00000368545 ABHD14AQ9BUJ0 271 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 CHST6Q9GZX3 395 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 SPACA1Q9HBV2 294 aa7.35□□□□□ -1.23
TPM3-213ENST00000368545 IGLV3-9A0A075B6K5 115 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 A0A0B4J293 547 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 ATP6V1G2-DDX39BF2Z307 99 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 MLNRO43193 412 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 OR7C1O76099 320 aaPredicted RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 TAS2R46P59540 309 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 DAZAP2Q15038 168 aaPredicted RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 ALKBH6Q3KRA9 238 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 HOGA1Q86XE5 327 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 FAM58AQ8N1B3 248 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 BPIFB2Q8N4F0 458 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 GVQW1Q8N7I0 195 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 SCCPDHQ8NBX0 429 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 OR4D10Q8NGI6 311 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 OR51S1Q8NGJ8 323 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 ALG5Q9Y673 324 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 UTP20O75691 2785 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 PLSCR5A0PG75 271 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 C7orf66A4D0T2 115 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 SYNGR1O43759 233 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 PRKACAP17612 351 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 HRH1P35367 487 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 SORDQ00796 357 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 VAX1Q5SQQ9 334 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 FIP1L1Q6UN15 594 aaKnown RBP7.34□□□□□ -1.23
TPM3-213ENST00000368545 WDR86Q86TI4 376 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 RTN4RL2Q86UN3 420 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 ARRDC1Q8N5I2 433 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 BEST4Q8NFU0 473 aa7.34□□□□□ -1.23
TPM3-213ENST00000368545 OR4S1Q8NGB4 309 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms