RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TOMM40LQ969M1 308 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 C1orf147Q96MC9 270 aaPredicted RBP9.15□□□□□ -0.95
TPM3-212ENST00000368533 GPR132Q9UNW8 380 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 FBXO7Q9Y3I1 522 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 PLCE1Q9P212 2302 aa9.15□□□□□ -0.95
TPM3-212ENST00000368533 OR6C6A6NF89 314 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 C1QTNF9BB2RNN3 333 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 MFNGO00587 321 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 LILRA1O75019 489 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 DHRS3O75911 302 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 C1QL1O75973 258 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 SFT2D2O95562 160 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 C1QTNF9P0C862 333 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 OPRM1P35372 400 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 KIR2DL2P43627 348 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZNF616Q08AN1 781 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 TAF9Q16594 264 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 TBR1Q16650 682 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ANKRD55Q3KP44 614 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 Q6ZS92 163 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 LRP11Q86VZ4 500 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZNF610Q8N9Z0 462 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 CLCF1Q9UBD9 225 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 STARD10Q9Y365 291 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 LRBAP50851 2863 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 FAM221AA4D161 298 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZNF724A8MTY0 619 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 UMAD1C9J7I0 102 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 OR2C1O95371 312 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZNF25P17030 456 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 TAS2R46P59540 309 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H3AP68431 136 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 RAB32Q13637 225 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 PNLIPRP3Q17RR3 467 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ACSF3Q4G176 576 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 HIST2H3PS2Q5TEC6 136 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 FAM214BQ7L5A3 538 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 TMEM230Q96A57 120 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 PECRQ9BY49 303 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 PRDM14Q9GZV8 571 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 DKK4Q9UBT3 224 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZFYVE26Q68DK2 2539 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 RRP8O43159 456 aaKnown RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 SELEP16581 610 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 OTX1P32242 354 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 PKIAP61925 76 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 SEM1Q6ZVN7 128 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 KDF1Q8NAX2 398 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 OR10C1Q96KK4 312 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 C2orf88Q9BSF0 95 aa9.14□□□□□ -0.95
TPM3-212ENST00000368533 ZNF2Q9BSG1 426 aaPredicted RBP9.14□□□□□ -0.95
TPM3-212ENST00000368533 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 ZNF850A8MQ14 1090 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 HLA-GP17693 338 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 BMP5P22003 454 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 FPR2P25090 351 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 DVL1P1P54792 670 aaPredicted RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 FXYD4P59646 89 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 PCBD1P61457 104 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 NUTF2P61970 127 aaKnown RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 HOXA4Q00056 320 aaPredicted RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 VAX1Q5SQQ9 334 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 DRAM2Q6UX65 266 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 OR56B2PQ8NGI1 322 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 OR1K1Q8NGR3 316 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 GMPPAQ96IJ6 420 aaPredicted RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 TAF9BQ9HBM6 251 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 FBLN5Q9UBX5 448 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 MSRB2Q9Y3D2 182 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 AQP7O14520 342 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 CXCL1P09341 107 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 MPZP25189 248 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 RPS23P62266 143 aaKnown RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 MIDNQ504T8 468 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 FAM180AQ6UWF9 173 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 SMIM8Q96KF7 97 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 RTBDNQ9BSG5 229 aaPredicted RBP9.13□□□□□ -0.95
TPM3-212ENST00000368533 FAAP24Q9BTP7 215 aa9.13□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 PAX6P26367 422 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 THBS4P35443 961 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 UBE2NP61088 152 aaKnown RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 FAM3AP98173 230 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 PLP2Q04941 152 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 TNFRSF9Q07011 255 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 SRSF4Q08170 494 aaKnown RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 IAH1Q2TAA2 248 aaPredicted RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
TPM3-212ENST00000368533 PLCXD3Q63HM9 321 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
TPM3-212ENST00000368533 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms