RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ELK1P19419 428 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 COX7A1P24310 79 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 NFYBP25208 207 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 SSTR5P35346 364 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 GDNFP39905 211 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 MRPS15P82914 257 aaKnown RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 DYNC1I2Q13409 638 aaKnown RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 BAIAP2L2Q6UXY1 529 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 PRR18Q8N4B5 295 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 NANPQ8TBE9 248 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 ARL11Q969Q4 196 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 UPRTQ96BW1 309 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 DMRTB1Q96MA1 342 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 C6orf62Q9GZU0 229 aaPredicted RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 ABCG5Q9H222 651 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 GAL3ST2Q9H3Q3 398 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 NCOR1P1Q9H4R4 102 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 METTL8Q9H825 291 aaKnown RBP11.39□□□□□ -0.59
TPM3-211ENST00000368531 TAS2R3Q9NYW6 316 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 CALYQ9NYX4 217 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 HIVEP1P15822 2718 aa11.39□□□□□ -0.59
TPM3-211ENST00000368531 KBTBD11-OT1A0A1B0GTJ5 212 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 TMEM235A6NFC5 223 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 CA11O75493 328 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 CLPXO76031 633 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 CGB3P0DN86 165 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 CGB7P0DN87 165 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 IGHV4-38-2P0DP08 117 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 PTHLHP12272 177 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 PRTN3P24158 256 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 TALDO1P37837 337 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 PAX5Q02548 391 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 ZNF260Q3ZCT1 412 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
TPM3-211ENST00000368531 RUSC1-AS1Q66K80 236 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 PNKDQ8N490 385 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 MCFD2Q8NI22 146 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 SUCNR1Q9BXA5 334 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 SLIRPQ9GZT3 109 aaKnown RBP11.38□□□□□ -0.59
TPM3-211ENST00000368531 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 KCNIP1Q9NZI2 227 aa11.38□□□□□ -0.59
TPM3-211ENST00000368531 MRPS7Q9Y2R9 242 aaKnown RBP11.38□□□□□ -0.59
TPM3-211ENST00000368531 CENPVL3A0A0U1RRI6 287 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 C12orf77C9JDV5 145 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 RNASEK-C17orf49H0YIS7 233 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 XRCC3O43542 346 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 NAPSAO96009 420 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 IGHV3-7P01780 117 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 APOA1P02647 267 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 GSTP1P09211 210 aaKnown RBP11.37□□□□□ -0.59
TPM3-211ENST00000368531 HOXB4P17483 251 aaPredicted RBP11.37□□□□□ -0.59
TPM3-211ENST00000368531 GZMHP20718 246 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 GNG2P59768 71 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 CHRFAM7AQ494W8 412 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 TMEM69Q5SWH9 247 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 GPR157Q5UAW9 335 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 Q6ZPA2 131 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 LAX1Q8IWV1 398 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 GAPTQ8N292 157 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 OR1L1Q8NH94 360 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 NUDCD2Q8WVJ2 157 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 C22orf15Q8WYQ4 148 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 MAFIPQ8WZ33 124 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 MIXL1Q9H2W2 232 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 C12orf4Q9NQ89 552 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 ZNF230Q9UIE0 474 aaPredicted RBP11.37□□□□□ -0.59
TPM3-211ENST00000368531 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 SOX21Q9Y651 276 aaPredicted RBP11.37□□□□□ -0.59
TPM3-211ENST00000368531 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
TPM3-211ENST00000368531 A0A0A6YYH2 397 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 IGHV3-43A0A0B4J1X8 118 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 A6NHS1 94 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 A6NJ64 397 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 SERPINE3A8MV23 424 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 ORC5O43913 435 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 HBZP02008 142 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 FCER2P06734 321 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 IGHV3-43DP0DP04 118 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 MNDAP41218 407 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 TAS2R20P59543 309 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 ARL6IP1Q15041 203 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 UTF1Q5T230 341 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 HACD4Q5VWC8 232 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
TPM3-211ENST00000368531 HEPN1Q6WQI6 88 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 BCL6BQ8N143 479 aaPredicted RBP11.36□□□□□ -0.59
TPM3-211ENST00000368531 TNFRSF14Q92956 283 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 LEAP2Q969E1 77 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 CMTM3Q96MX0 182 aa11.36□□□□□ -0.59
TPM3-211ENST00000368531 MS4A7Q9GZW8 240 aaPredicted RBP11.36□□□□□ -0.59
TPM3-211ENST00000368531 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms