RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ASCL5Q7RTU5 278 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 SPICQ8N5J4 248 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 FAM222BQ8WU58 562 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 AMELYQ99218 206 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 P2RX4Q99571 388 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 CISD1Q9NZ45 108 aaKnown RBP11.22□□□□□ -0.61
PTPRK-207ENST00000368226 A1L4Q6 167 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 HTR1DP28221 377 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 DYNLRB2Q8TF09 96 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 MMP26Q9NRE1 261 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 INHBBP09529 407 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 CXCL3P19876 107 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 RNFT1Q5M7Z0 435 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
PTPRK-207ENST00000368226 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 COX6A1P12074 109 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 ACP1P24666 158 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 UCNP55089 124 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 HIST1H3AP68431 136 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 TMEM241Q24JQ0 296 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 TMPRSS5Q9H3S3 457 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 RPL36A-HNRNPH2H7BZ11 118 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 GATCO43716 136 aaKnown RBP11.22□□□□□ -0.61
PTPRK-207ENST00000368226 SEMA7AO75326 666 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 ASAH2BP0C7U1 165 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 TMEM91Q6ZNR0 172 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 OR4X1Q8NH49 305 aa11.22□□□□□ -0.61
PTPRK-207ENST00000368226 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 LNP1A1A4G5 178 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 PTP4A3O75365 173 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 IGSF11Q5DX21 431 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 VSTM2AQ8TAG5 236 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 DDA1Q9BW61 102 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 HAX1O00165 279 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 GDF9O60383 454 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 FGF5P12034 268 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 GZMHP20718 246 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 MPV17LQ2QL34 196 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 GPHA2Q96T91 129 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 ANGPTL4Q9BY76 406 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 WASHC3Q9Y3C0 194 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 OR2W1Q9Y3N9 320 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 WISP3O95389 354 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-207ENST00000368226 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 CLEC2AQ6UVW9 174 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 LEAP2Q969E1 77 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 ST6GALNAC2Q9UJ37 374 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
PTPRK-207ENST00000368226 DNPH1O43598 174 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 SYNGR1O43759 233 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 RPEL1Q2QD12 228 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-207ENST00000368226 RGP1Q92546 391 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-207ENST00000368226 ATP5SQ99766 215 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 FCN1O00602 326 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 ORM1P02763 201 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 PGA4P0DJD7 388 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 FAM24BQ8N5W8 94 aa11.21□□□□□ -0.62
PTPRK-207ENST00000368226 TMEM210A6NLX4 147 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 SMAD7O15105 426 aaKnown RBP11.2□□□□□ -0.62
PTPRK-207ENST00000368226 IGF2P01344 180 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 CD40P25942 277 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 OIT3Q8WWZ8 545 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 SRD5A3Q9H8P0 318 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 MGPP08493 103 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 TEX30Q5JUR7 227 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 ASB13Q8WXK3 278 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 RCC2Q9P258 522 aaKnown RBP11.2□□□□□ -0.62
PTPRK-207ENST00000368226 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 RBM11P57052 281 aaKnown RBP11.2□□□□□ -0.62
PTPRK-207ENST00000368226 OR8I2Q8N0Y5 310 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 PRSS3P2Q8NHM4 247 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 NGFRP08138 427 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 TMEM50BP56557 158 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 LY6EQ16553 131 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 LINC01560Q8TB33 94 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 ZNF714Q96N38 554 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 AUP1Q9Y679 476 aa11.2□□□□□ -0.62
PTPRK-207ENST00000368226 RPS4Y1P22090 263 aaKnown RBP11.19□□□□□ -0.62
PTPRK-207ENST00000368226 SLC6A1P30531 599 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 SCAND1P57086 179 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 PGLYRP3Q96LB9 341 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 PHOX2AO14813 284 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 SFTPCP11686 197 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 BVESQ8NE79 360 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 LOXL4Q96JB6 756 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 NEURL2Q9BR09 285 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 LY75O60449 1722 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 TDRD6O60522 2096 aaKnown RBP11.19□□□□□ -0.62
PTPRK-207ENST00000368226 PRR33A8MZF0 331 aa11.19□□□□□ -0.62
PTPRK-207ENST00000368226 OR5AL1P0C617 328 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms