RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 OR51J1Q9H342 316 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 RIMS4Q9H426 269 aaPredicted RBP9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 C12orf4Q9NQ89 552 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 TAAR3PQ9P1P4 343 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 ZDHHC8Q9ULC8 765 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 ATP23Q9Y6H3 246 aa9.38□□□□□ -0.91
CSNK1E-202ENST00000366216 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 TRAV24A0A0B4J272 114 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 UBE2QL1A1L167 161 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 ZSCAN5BA6NJL1 495 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 A6NLC8 198 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 CEACAM18A8MTB9 384 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 DEGS1O15121 323 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 CCNKO75909 580 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 NXPH2O95156 264 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 GATA4P43694 442 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 PDCD1Q15116 288 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 CDK10Q15131 360 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 CD276Q5ZPR3 534 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 WDR82Q6UXN9 313 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 SLC36A1Q7Z2H8 476 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 TERB2Q8NHR7 220 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 CCDC107Q8WV48 283 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 ELMOD3Q96FG2 381 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 MEGF10Q96KG7 1140 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 JMJD8Q96S16 334 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 DIRC2Q96SL1 478 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 MED28Q9H204 178 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 PPA2Q9H2U2 334 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF286AQ9HBT8 521 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 RASL12Q9NYN1 266 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 TREM2Q9NZC2 230 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 IL36RNQ9UBH0 155 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 GLS2Q9UI32 602 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF230Q9UIE0 474 aaPredicted RBP9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
CSNK1E-202ENST00000366216 TMEM82A0PJX8 343 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 SH2D1BO14796 132 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 NAPSAO96009 420 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 KNG1P01042 644 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 CSN2P05814 226 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ADH4P08319 380 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ANXA7P20073 488 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 TNFSF4P23510 183 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 MDH2P40926 338 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ECI1P42126 302 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF81P51508 661 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 SNRPD2P62316 118 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 MPPED2Q15777 294 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ADIPOQQ15848 244 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ATPAF1Q5TC12 328 aaPredicted RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 PRAMEF6Q5VXH4 476 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ACP7Q6ZNF0 438 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 FAM90A1Q86YD7 464 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ERGIC1Q969X5 290 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 SCGB3A2Q96PL1 93 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 VRK1Q99986 396 aaPredicted RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 DPCDQ9BVM2 203 aaPredicted RBP9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 EHFQ9NZC4 300 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 IL19Q9UHD0 177 aa9.36□□□□□ -0.91
CSNK1E-202ENST00000366216 IGKV1D-8A0A087WSZ0 117 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 OR2AT4A6NND4 320 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 BOLA2-SMG1P6H3BVE0 249 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 IFNL4K9M1U5 179 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 SLC33A1O00400 549 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 SPRY3O43610 288 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 OR2H2O95918 312 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 HPXP02790 462 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 RLN1P04808 185 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 CD55P08174 381 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 VSIG10L2P0DP72 767 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF44P15621 663 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 GLRA1P23415 457 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 LMO1P25800 156 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 DUSP1P28562 367 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 ARPC4P59998 168 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 TSPAN5P62079 268 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 CD300CQ08708 224 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 SMIM21Q3B7S5 101 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF626Q68DY1 528 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 FAHD2BQ6P2I3 314 aaPredicted RBP9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF880Q6PDB4 577 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 ZNF826PQ6ZT77 177 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 MAFIPQ8WZ33 124 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 DYRK2Q92630 601 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 FAHD2AQ96GK7 314 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 OR2V2Q96R30 315 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 Q9N2K0 584 aa9.35□□□□□ -0.91
CSNK1E-202ENST00000366216 NECAP2Q9NVZ3 263 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms