RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 TRAV34A0A0B4J273 112 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 RNF224P0DH78 156 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF17P17021 662 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 RAC3P60763 192 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 PPP1CBP62140 327 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 COTL1Q14019 142 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
COL6A1-201ENST00000361866 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 HIST1H3AP68431 136 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 COL19A1Q14993 1142 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 TIPARPQ7Z3E1 657 aaKnown RBP12.08□□□□□ -0.48
COL6A1-201ENST00000361866 BORCS7Q96B45 105 aa12.08□□□□□ -0.48
COL6A1-201ENST00000361866 NGFP01138 241 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF25P17030 456 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-201ENST00000361866 SLC25A47Q6Q0C1 308 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 GCNT2Q8N0V5 402 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 GALMQ96C23 342 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 GPR12P47775 334 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 OR3A1P47881 315 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 FHL1Q13642 323 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 BTNL3Q6UXE8 466 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 OR2T10Q8NGZ9 312 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 CD46P15529 392 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 NPBWR2P48146 333 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 C3AR1Q16581 482 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 SPINK14Q6IE38 97 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 BTNL8Q6UX41 500 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM204Q9BSN7 226 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 NOTCH4Q99466 2003 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
COL6A1-201ENST00000361866 PRF1P14222 555 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 IRF2P14316 349 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 HABP2Q14520 560 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-201ENST00000361866 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
COL6A1-201ENST00000361866 KCNE4Q8WWG9 221 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 SMIM8Q96KF7 97 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 TP53RKQ96S44 253 aa12.07□□□□□ -0.48
COL6A1-201ENST00000361866 PLXNA3P51805 1871 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 IGKV1D-8A0A087WSZ0 117 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PAGE4O60829 102 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 ADCYAP1P18509 176 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 ALKBH6Q3KRA9 238 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 AUP1Q9Y679 476 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 RAB4AP20338 218 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PMCHP20382 165 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PCP4P48539 62 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PNRC1Q12796 327 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-201ENST00000361866 SIGLECL1Q8N7X8 197 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 POC1BQ8TC44 478 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 SH3BGRL2Q9UJC5 107 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PSG4Q00888 419 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF385CQ66K41 422 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-201ENST00000361866 PRR27Q6MZM9 219 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 UBALD2Q8IYN6 164 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-201ENST00000361866 VAX2Q9UIW0 290 aa12.06□□□□□ -0.48
COL6A1-201ENST00000361866 ATXN7O15265 892 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 RBM11P57052 281 aaKnown RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 GAMTQ14353 236 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM211Q6ICI0 200 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 FGF16O43320 207 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TRGC1P0CF51 173 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 ARR3P36575 388 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 KHDC3LQ587J8 217 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 A0A0A6YYD4 124 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 IGKV1-9A0A0C4DH69 117 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 KIAA1324LA8MWY0 1029 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 CDIPTO14735 213 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TIAF1O95411 115 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 MDH2P40926 338 aaKnown RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM187Q14656 261 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 ZNF837Q96EG3 531 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 Q96M66 194 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM222Q9H0R3 208 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 TMEM38BQ9NVV0 291 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 B3GAT1Q9P2W7 334 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 METTL1Q9UBP6 276 aaKnown RBP12.05□□□□□ -0.48
COL6A1-201ENST00000361866 NAT8Q9UHE5 227 aa12.05□□□□□ -0.48
COL6A1-201ENST00000361866 FCGR3BO75015 233 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-201ENST00000361866 Q9N2K0 584 aa12.04□□□□□ -0.48
COL6A1-201ENST00000361866 HSBP1L1C9JCN9 74 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms