RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 IL13RA2Q14627 380 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 CEACAM21Q3KPI0 293 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 MRGPRFQ96AM1 343 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 MAP1LC3BQ9GZQ8 125 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 CTHRC1Q96CG8 243 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 SLC2A9Q9NRM0 540 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 PIPOXQ9P0Z9 390 aa16.15■□□□□ 0.18
CLIP2-202ENST00000361545 ZNF883P0CG24 379 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 RBM11P57052 281 aaKnown RBP16.14■□□□□ 0.17
CLIP2-202ENST00000361545 FHL5Q5TD97 284 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 OR1K1Q8NGR3 316 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 KLRB1Q12918 225 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 FBXL17Q9UF56 701 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 HILPDAQ9Y5L2 63 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 CYB5R1Q9UHQ9 305 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 DTD1Q8TEA8 209 aa16.14■□□□□ 0.17
CLIP2-202ENST00000361545 CHST1O43916 411 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 CA11O75493 328 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 ARG1P05089 322 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 CDC34P49427 236 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-202ENST00000361545 PRSS54Q6PEW0 395 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SLC25A47Q6Q0C1 308 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 MRGPRGQ86SM5 289 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 OR10G4Q8NGN3 311 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 OR10G9Q8NGN4 311 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 OR10G7Q8NGN6 311 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 RBBP6Q7Z6E9 1792 aaKnown RBP16.13■□□□□ 0.17
CLIP2-202ENST00000361545 FGF8P55075 233 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SURF2Q15527 256 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SIGLEC12Q96PQ1 595 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 A0A0U1RQV5 110 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SEMA7AO75326 666 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 NAT2P11245 290 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 TRIM77I1YAP6 450 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SPP1P10451 314 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 RAG2P55895 527 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 IRF3Q14653 427 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SIGIRRQ6IA17 410 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 OR4A4PQ8NGN8 299 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 CKAP5Q14008 2032 aa16.13■□□□□ 0.17
CLIP2-202ENST00000361545 SYNGR1O43759 233 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 RD3LP0DJH9 198 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 GUK1Q16774 197 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 TEX30Q5JUR7 227 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 C1orf174Q8IYL3 243 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 RFPL3SP0C7P2 107 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 VDAC1P21796 283 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 DYNLT3P51808 116 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 TMEM88Q6PEY1 159 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 ZNF714Q96N38 554 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 DIRC2Q96SL1 478 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 MIXL1Q9H2W2 232 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 SH2D2AQ9NP31 389 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 NQO2P16083 231 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 TEX261Q6UWH6 196 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 TIMP4Q99727 224 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 RSRP1Q9BUV0 290 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 U3KQ87 197 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 IGHV3-21A0A0B4J1V1 117 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 TMEM33P57088 247 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 LINC00596Q86U02 117 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 SCNM1Q9BWG6 230 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
CLIP2-202ENST00000361545 GSTZ1O43708 216 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-202ENST00000361545 FAM219AQ8IW50 185 aa16.12■□□□□ 0.17
CLIP2-202ENST00000361545 F5H697 171 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 CTDSPLO15194 276 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 SPINK4O60575 86 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 IGKV3-11P04433 115 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 NAT1P18440 290 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 DOLPP1Q86YN1 238 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 SSMEM1Q8WWF3 244 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 MRPL24Q96A35 216 aaKnown RBP16.11■□□□□ 0.17
CLIP2-202ENST00000361545 PGLYRP3Q96LB9 341 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 ZDHHC11Q9H8X9 412 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 RNF115Q9Y4L5 304 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 PCDHGA9Q9Y5G4 932 aaKnown RBP16.11■□□□□ 0.17
CLIP2-202ENST00000361545 A0A1W2PP11 408 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 CELA3AP09093 270 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 ZNF429Q86V71 674 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 OR5R1Q8NH85 324 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 MARVELD1Q9BSK0 173 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 IGHV3-72A0A0B4J1Y9 119 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 RNASEK-C17orf49H0YIS7 233 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 IGLV3-21P80748 117 aaPredicted RBP16.11■□□□□ 0.17
CLIP2-202ENST00000361545 LPAR3Q9UBY5 353 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 IGLV3-19P01714 112 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 PSG2P11465 335 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 CD200P41217 278 aa16.11■□□□□ 0.17
CLIP2-202ENST00000361545 UBE2L3P68036 154 aaKnown RBP16.11■□□□□ 0.17
CLIP2-202ENST00000361545 RBM38Q9H0Z9 239 aaKnown RBP16.11■□□□□ 0.17
CLIP2-202ENST00000361545 IGLV1-36A0A0B4J1U3 117 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 INHBBP09529 407 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 DHRS7BQ6IAN0 325 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 CCDC144NLQ6NUI1 221 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 LINC01560Q8TB33 94 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 V9GYH0 126 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 SFTA3P0C7M3 94 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 ZNF154Q13106 437 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 APCDD1LQ8NCL9 501 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms