RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DIRC2Q96SL1 478 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SMUG1Q53HV7 270 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 IBA57Q5T440 356 aaKnown RBP8.23□□□□□ -1.09
VPS13A-203ENST00000360280 SMIM14Q96QK8 99 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 CXXC4Q9H2H0 198 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 MTCH2Q9Y6C9 303 aa8.23□□□□□ -1.09
VPS13A-203ENST00000360280 LINC00862A6NCI5 91 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TMPRSS2O15393 492 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 XAF1Q6GPH4 301 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 BRWD1Q9NSI6 2320 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TMEM78Q5T7P6 136 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 SPAG8Q99932 426 aaPredicted RBP8.22□□□□□ -1.09
VPS13A-203ENST00000360280 RAB33BQ9H082 229 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TRAV38-1A0A0B4J264 116 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 FCMRO60667 390 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ACVR1Q04771 509 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 LILRA3Q8N6C8 439 aaPredicted RBP8.22□□□□□ -1.09
VPS13A-203ENST00000360280 DDA1Q9BW61 102 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 CCL26Q9Y258 94 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 SIGLEC7Q9Y286 467 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 FANCMQ8IYD8 2048 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 CDX4O14627 284 aaPredicted RBP8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PLPPR2Q96GM1 343 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF441Q8N8Z8 693 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 OR10J6PQ8NGY7 276 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF275Q9NSD4 429 aaPredicted RBP8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 KCNE3Q9Y6H6 103 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TRBV9A0A0B4J1U6 114 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 KLK8O60259 260 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PPP1R17O96001 155 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 HLA-DRB1P01911 266 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ANKRD37Q7Z713 158 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 OR5M9Q8NGP3 310 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 SSMEM1Q8WWF3 244 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PAGE4O60829 102 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 KBTBD11O94819 623 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 S1PR2O95136 353 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 RND1Q92730 232 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PAXXQ9BUH6 204 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 JKAMPQ9P055 326 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TNRC6CQ9HCJ0 1690 aaKnown RBP8.22□□□□□ -1.09
VPS13A-203ENST00000360280 CRYGNQ8WXF5 182 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 RTP5Q14D33 572 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 OR8B2Q96RD0 313 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 CNTD2Q9H8S5 307 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 PCOLCE2Q9UKZ9 415 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 LIPFP07098 398 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 ROM1Q03395 351 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 MRGPRDQ8TDS7 321 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 HIGD1AQ9Y241 93 aa8.22□□□□□ -1.09
VPS13A-203ENST00000360280 TGIF2-C20orf24A0A0A6YYL0 155 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF83P51522 516 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 PTOV1Q86YD1 416 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 OR1P1Q8NH06 330 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF137PP52743 207 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 DLX6P56179 175 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 ALKAL1Q6UXT8 129 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 NT5CQ8TCD5 201 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 SLC25A17O43808 307 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 SELENOPP49908 381 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 TNFSF10P50591 281 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 DEFB103AP81534 67 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 FOXF1Q12946 379 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF506Q5JVG8 444 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 MNX1P50219 401 aaPredicted RBP8.21□□□□□ -1.09
VPS13A-203ENST00000360280 MMP16P51512 607 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 TSPO2Q5TGU0 170 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 LRRC29Q8WV35 223 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 WNT16Q9UBV4 365 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 MYOFQ9NZM1 2061 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 ZNF735P0CB33 412 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 EWSR1Q01844 656 aaKnown RBP eCLIP8.21□□□□□ -1.09
VPS13A-203ENST00000360280 RAB1CQ92928 201 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 LOXL2Q9Y4K0 774 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 MPC1Q9Y5U8 109 aa8.21□□□□□ -1.09
VPS13A-203ENST00000360280 TRGV8A0A0C4DH27 118 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 OR10D3Q8NH80 312 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 PPYP01298 95 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 AMY1AP04745 511 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 COX7A1P24310 79 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 SLC35B1P78383 322 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 MEF2CQ06413 473 aaPredicted RBP8.21□□□□□ -1.1
VPS13A-203ENST00000360280 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.1
VPS13A-203ENST00000360280 OR4D9Q8NGE8 314 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 CCL17Q92583 94 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 NEUROG1Q92886 237 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 SYNGR1O43759 233 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 OVCH2Q7RTZ1 564 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 ELSPBP1Q96BH3 223 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 QSER1Q2KHR3 1735 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 PRSS2P07478 247 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 LRRC75BQ2VPJ9 315 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 DNAJB12Q9NXW2 375 aaKnown RBP8.21□□□□□ -1.1
VPS13A-203ENST00000360280 ABCA3Q99758 1704 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms