RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RBMXL1Q96E39 390 aaKnown RBP9.6□□□□□ -0.87
SSU72-202ENST00000359060 MSL2Q9HCI7 577 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 TAAR3PQ9P1P4 343 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 URGCP-MRPS24S4R325 110 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
SSU72-202ENST00000359060 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 DEFB108AA8MXU0 73 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 F8VVB4 439 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 F8VWA3 439 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 RHBDL1O75783 438 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 CD59P13987 128 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 TUBG1P23258 451 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 DVL1P1P54792 670 aaPredicted RBP9.6□□□□□ -0.87
SSU72-202ENST00000359060 UBE2KP61086 200 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 TLE4Q04727 773 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 NSUN5P2Q63ZY6 315 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 RXFP4Q8TDU9 374 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 IGHV3-43A0A0B4J1X8 118 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 DFFBO76075 338 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 IGHV3-13P01766 116 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 IGHV3-7P01780 117 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 METTL15P1P0C7V9 234 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 IGHV3-43DP0DP04 118 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 DAOP14920 347 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 P2RY1P47900 373 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ZNF154Q13106 437 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 ZNF818PQ6ZRF7 136 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 FOXL2NBQ6ZUU3 175 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 SSX9Q7RTT3 188 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 NRIP2Q9BQI9 281 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 LINC00470Q9BZP3 86 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 PSENENQ9NZ42 101 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 PROCRQ9UNN8 238 aa9.6□□□□□ -0.87
SSU72-202ENST00000359060 STRAPQ9Y3F4 350 aaKnown RBP9.6□□□□□ -0.87
SSU72-202ENST00000359060 CDS2O95674 445 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 MMP7P09237 267 aaPredicted RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 SULT1A2P50226 295 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 DYNLT3P51808 116 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 OR1K1Q8NGR3 316 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 WBP1Q96G27 269 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 ADGRG7Q96K78 797 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 TMEM222Q9H0R3 208 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 Q9N2K0 584 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 GNG13Q9P2W3 67 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 OR2W1Q9Y3N9 320 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 PSG2P11465 335 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 CBR1P16152 277 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 RPS10P46783 165 aaKnown RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 NPBWR1P48145 328 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 CEBPDP49716 269 aaPredicted RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 ERVS71-1P61550 626 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 TPRX1Q8N7U7 411 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 DMBX1Q8NFW5 382 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 MRGPRDQ8TDS7 321 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 GALMQ96C23 342 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 GNPNAT1Q96EK6 184 aaPredicted RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 BIN3Q9NQY0 253 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 POMT1Q9Y6A1 747 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 SPTAN1Q13813 2472 aaKnown RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 DBX1A6NMT0 343 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 HLA-DRB3P79483 266 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 SRSF3P84103 164 aaKnown RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 SH3BGRL3Q9H299 93 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 DLL3Q9NYJ7 618 aa9.59□□□□□ -0.87
SSU72-202ENST00000359060 PURGQ9UJV8 347 aaKnown RBP9.59□□□□□ -0.87
SSU72-202ENST00000359060 LRP5LA4QPB2 252 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 M0R1B8 84 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 ZNF83P51522 516 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 RUNX1Q01196 453 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 HMGN3Q15651 99 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 DHRS11Q6UWP2 260 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 Q8IYB0 196 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 LFNGQ8NES3 379 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 OR2Z1Q8NG97 314 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 SDSLQ96GA7 329 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 NUP210LQ5VU65 1888 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 C19orf67A6NJJ6 358 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 TRIM77I1YAP6 450 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 SPINT2O43291 252 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 PMELP40967 661 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 RAB5CP51148 216 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 RAB11AP62491 216 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 TLE1Q04724 770 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 GLRX5Q86SX6 157 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 NTNG2Q96CW9 530 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 POM121L2Q96KW2 1035 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 SH2D2AQ9NP31 389 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 HEXAP06865 529 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 CELA3BP08861 270 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 PRAMEF6Q5VXH4 476 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 ISOC2Q96AB3 205 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 GMPPAQ96IJ6 420 aaPredicted RBP9.58□□□□□ -0.88
SSU72-202ENST00000359060 LOXL4Q96JB6 756 aa9.58□□□□□ -0.88
SSU72-202ENST00000359060 MRPS18CQ9Y3D5 142 aaKnown RBP9.58□□□□□ -0.88
SSU72-202ENST00000359060 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms