RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CDS2O95674 445 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 SCGB1D2O95969 90 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 PPYP01298 95 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 CRYABP02511 175 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 HEXAP06865 529 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 MUC1P15941 1255 aaPredicted RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 AADACP22760 399 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 RAB5CP51148 216 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 MRPL49Q13405 166 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 HMGN3Q15651 99 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 SP6Q3SY56 376 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 PHLDA2Q53GA4 152 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 OR5P3Q8WZ94 311 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 ABHD14BQ96IU4 210 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 HS3ST6Q96QI5 342 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 GINS3Q9BRX5 216 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 MPC1Q9Y5U8 109 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 CLEC18AA5D8T8 446 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 H7C2Y5 167 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 MPPED1O15442 326 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 CTXN2P0C2S0 81 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 IL32P24001 234 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 DVL1P1P54792 670 aaPredicted RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 FBXW12Q6X9E4 464 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 P4HA3Q7Z4N8 544 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 CLEC18CQ8NCF0 446 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 OR5L1Q8NGL2 311 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 GTF3AQ92664 365 aaKnown RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 SPIN2AQ99865 258 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 SPIN2BQ9BPZ2 258 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 PLK3Q9H4B4 646 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 Q9N2K0 584 aa12.18□□□□□ -0.46
NIPAL3-203ENST00000358028 MAST4O15021 2626 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 PIGBOS1A0A0B4J2F0 54 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 KIR2DS1A0A191URI9 304 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 PHF1O43189 567 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 SYNGR1O43759 233 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 NAPSAO96009 420 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 GNLYP22749 145 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 KIR2DS1Q14954 304 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 OR4D5Q8NGN0 318 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 TMEM222Q9H0R3 208 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 SPACA1Q9HBV2 294 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-203ENST00000358028 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 POLEQ07864 2286 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 TRDCB7Z8K6 153 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 LILRA1O75019 489 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 TK1P04183 234 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 PVALBP20472 110 aaPredicted RBP12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 UCP2P55851 309 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 GNMTQ14749 295 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 HFEQ30201 348 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 IGSF11Q5DX21 431 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 FAM76BQ5HYJ3 339 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 Q6ZRG5 221 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 OR11L1Q8NGX0 322 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 ERGIC1Q969X5 290 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 PRELID3BQ9Y3B1 194 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 UTP20O75691 2785 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-203ENST00000358028 IGHG3P01860 377 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SFTA3P0C7M3 94 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 DANCRP0C864 163 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SPP1P10451 314 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 PRKACAP17612 351 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 KCNJ3P48549 501 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 GNG3P63215 75 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF573Q86YE8 665 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 ST6GALNAC3Q8NDV1 305 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 PLA2G2EQ9NZK7 142 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 FAM96BQ9Y3D0 163 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 KPTNQ9Y664 436 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 NDUFA2O43678 99 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SRSF1Q07955 248 aaKnown RBP eCLIP12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 IL24Q13007 206 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 OR2T2Q6IF00 324 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF565Q8N9K5 539 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 NEK7Q8TDX7 302 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 KIRREL1Q96J84 757 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 ZNF488Q96MN9 340 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 SMIM3Q9BZL3 60 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 PKIBQ9C010 78 aa12.15□□□□□ -0.46
NIPAL3-203ENST00000358028 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms