RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 SFTPBP07988 381 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 FCGR2CP31995 323 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 SPCS2Q15005 226 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 ZNF146Q15072 292 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 STUMQ69YW2 141 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 C1QL2Q7Z5L3 287 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 HES4Q9HCC6 221 aa7.69□□□□□ -1.18
UPF2-202ENST00000357604 MEIS3P1A6NDR6 274 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 PPP5CP53041 499 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 MAB21L1Q13394 359 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 TMEM133Q9H2Q1 129 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 IFT22Q9H7X7 185 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 FER1L5A0AVI2 2057 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 IGHV3-43A0A0B4J1X8 118 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 FAM221AA4D161 298 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 IGHV3-43DP0DP04 118 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 PSKH1P11801 424 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 GPX8Q8TED1 209 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 SSMEM1Q8WWF3 244 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 DPF1Q92782 380 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 HINT2Q9BX68 163 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 PRSS22Q9GZN4 317 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 RPUSD1Q9UJJ7 312 aaKnown RBP7.68□□□□□ -1.18
UPF2-202ENST00000357604 IGHV4-30-2A0A087WSY4 118 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 M0QZ24 198 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 PRAF2O60831 178 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 C1orf122Q6ZSJ8 110 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 ARRDC1Q8N5I2 433 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 TCTEX1D1Q8N7M0 179 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 MMP28Q9H239 520 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 SIRT4Q9Y6E7 314 aaPredicted RBP7.68□□□□□ -1.18
UPF2-202ENST00000357604 CHD9Q3L8U1 2897 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 TMEM235A6NFC5 223 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 RFX2P48378 723 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 RAB11AP62491 216 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 FAM201AQ5SY85 155 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 KCTD9Q7L273 389 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 PDZD9Q8IXQ8 264 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 RFESDQ8TAC1 157 aa7.68□□□□□ -1.18
UPF2-202ENST00000357604 ZMAT5Q9UDW3 170 aaKnown RBP7.68□□□□□ -1.18
UPF2-202ENST00000357604 TRAV40A0A0B4J280 105 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR5H14A6NHG9 310 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 H2AFB2P0C5Z0 115 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 SMIM18P0DKX4 95 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 RBMS2Q15434 407 aaKnown RBP7.67□□□□□ -1.18
UPF2-202ENST00000357604 XAF1Q6GPH4 301 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR10K2Q6IF99 312 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 LINC00299Q6ZSB3 139 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR8H3Q8N146 312 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ZNRF1Q8ND25 227 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR4S1Q8NGB4 309 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR8H1Q8NGG4 311 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ANGPTL6Q8NI99 470 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 FLYWCH2Q96CP2 140 aaKnown RBP7.67□□□□□ -1.18
UPF2-202ENST00000357604 TMEM56Q96MV1 263 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 SLC25A21Q9BQT8 299 aaPredicted RBP7.67□□□□□ -1.18
UPF2-202ENST00000357604 COMMD5Q9GZQ3 224 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 SLC35D1Q9NTN3 355 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 NINQ8N4C6 2090 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 NPFFO15130 113 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 IFNA17P01571 189 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ELK1P19419 428 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 GDNFP39905 211 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ZP1P60852 638 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ZNF66Q6ZN08 573 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 TMEM91Q6ZNR0 172 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 Q6ZR03 302 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 PCSK5Q92824 1860 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 A0A0G2JK05 382 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 C13orf42A0A1B0GVH6 325 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 CD34P28906 385 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 VDAC2P45880 294 aaPredicted RBP7.67□□□□□ -1.18
UPF2-202ENST00000357604 LGALS7P47929 136 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OR1L6Q8NGR2 347 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 DCUN1D4Q92564 292 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 GPR61Q9BZJ8 451 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 A0A0A6YYJ9 748 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 CEBPZOSA8MTT3 80 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 OVOL3O00110 214 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 GPR137BO60478 399 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ERHP84090 104 aaKnown RBP7.67□□□□□ -1.18
UPF2-202ENST00000357604 SRSF7Q16629 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
UPF2-202ENST00000357604 FAM27D1Q5T7N8 215 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 CD200R1LQ6Q8B3 271 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 ZNF788Q6ZQV5 615 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 MALSU1Q96EH3 234 aa7.67□□□□□ -1.18
UPF2-202ENST00000357604 UBE2E1P51965 193 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 GSG1LQ6UXU4 331 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 CENPSQ8N2Z9 138 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 ZNF645Q8N7E2 425 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 OR6Q1Q8NGQ2 317 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 OR2T6Q8NHC8 308 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 NUDCD2Q8WVJ2 157 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 MED28Q9H204 178 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 RDH8Q9NYR8 311 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 FBLN5Q9UBX5 448 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 OR2W1Q9Y3N9 320 aa7.66□□□□□ -1.18
UPF2-202ENST00000357604 HILPDAQ9Y5L2 63 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms